Os06g0531200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DJ-1 family protein.
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Os06g0531200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DJ-1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.13 | 0.29 | 11.4 | -0.367 | 0.382 | 0.551 | 0.282 | 1.02 | -0.608 | 21.7 | 26.55 | 1013 | -- | -- |
| 39.83 | 0.294 | 11.4 | -0.437 | 0.367 | 0.587 | 0.497 | -- | -0.633 | 21.5 | 26.35 | 1025 | -- | -- |
| 38.21 | 0.288 | 11.4 | -0.372 | 0.356 | 0.572 | -- | 1.18 | -0.607 | 22.2 | 24.48 | 975 | -- | -- |
| 40.74 | 0.297 | 11.4 | -0.457 | 0.352 | 0.595 | -- | -- | -0.618 | 21.7 | 17.23 | 1025 | -- | -- |
| 41.72 | 0.301 | 11.4 | -0.394 | -- | 0.788 | -- | 1.04 | -0.627 | -- | -8.166e-05 | 1025 | -- | -- |
| 48.67 | 0.327 | 11.4 | -0.38 | 0.601 | -- | 0.624 | -- | -0.548 | 21.2 | -- | -- | -- | -- |
| 50.04 | 0.331 | 11.4 | -0.402 | 0.598 | -- | -- | -- | -0.549 | 21.2 | -- | -- | -- | -- |
| 43.17 | 0.306 | 11.4 | -0.48 | -- | 0.873 | -- | -- | -0.641 | -- | 8.207e-06 | 1014 | -- | -- |
| 46.28 | 0.317 | 11.4 | -- | 0.355 | 0.553 | -- | -- | -0.587 | 21.9 | 16.96 | 988 | -- | -- |
| 70.82 | 0.393 | 11.4 | -0.4 | -- | -- | -- | -- | -0.552 | -- | -- | -- | -- | -- |
| 54.3 | 0.345 | 11.4 | -- | 0.598 | -- | -- | -- | -0.504 | 21.2 | -- | -- | -- | -- |
| 49.42 | 0.327 | 11.4 | -- | -- | 0.862 | -- | -- | -0.619 | -- | -4.069 | 1004 | -- | -- |
| 75.04 | 0.404 | 11.4 | -- | -- | -- | -- | -- | -0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.80 | temperature | 10 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 36.96 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 54 | 37.14 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 235 | 37.55 | temperature | 10 | 14400 | > th | dose dependent | sin | 23 | NA |
| 345 | 37.68 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 432 | 37.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 433 | 37.78 | temperature | 30 | 14400 | < th | dose dependent | sin | 23 | NA |
| 601 | 37.94 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 725 | 38.05 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 952 | 38.21 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 986 | 38.22 | temperature | 10 | 14400 | > th | dose dependent | rect. | 19 | 23 |