Os06g0530400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : OsNAC7 protein.
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Os06g0530400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : OsNAC7 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.49 | 0.457 | 3 | 0.125 | 0.0924 | -0.719 | -0.336 | -2.12 | 0.0203 | 7.32 | 8.958 | 1412 | -- | -- |
| 94.69 | 0.453 | 2.98 | 0.085 | 0.0918 | -0.281 | -0.352 | -- | 0.0318 | 7.31 | 8.8 | 1411 | -- | -- |
| 94.78 | 0.453 | 3.01 | 0.127 | 0.095 | -0.763 | -- | -2.35 | 0.019 | 7.07 | 8.801 | 1411 | -- | -- |
| 94.84 | 0.454 | 2.99 | 0.0717 | 0.0931 | -0.307 | -- | -- | 0.0236 | 6.99 | 10.51 | 1420 | -- | -- |
| 95.22 | 0.454 | 3.01 | 0.124 | -- | -0.749 | -- | -2.29 | 0.0221 | -- | 8.882 | 1411 | -- | -- |
| 95.38 | 0.458 | 2.99 | 0.0347 | 0.0891 | -- | -0.349 | -- | 0.0059 | 7.24 | -- | -- | -- | -- |
| 95.7 | 0.458 | 2.99 | 0.0271 | 0.0891 | -- | -- | -- | 0.00646 | 6.96 | -- | -- | -- | -- |
| 95.21 | 0.454 | 2.99 | 0.0638 | -- | -0.334 | -- | -- | 0.025 | -- | 10.5 | 1338 | -- | -- |
| 94.87 | 0.454 | 2.99 | -- | 0.0912 | -0.317 | -- | -- | 0.0153 | 7.03 | 10.57 | 1338 | -- | -- |
| 96.12 | 0.458 | 2.99 | 0.0289 | -- | -- | -- | -- | 0.00812 | -- | -- | -- | -- | -- |
| 95.72 | 0.458 | 2.99 | -- | 0.0894 | -- | -- | -- | 0.00345 | 6.94 | -- | -- | -- | -- |
| 95.31 | 0.455 | 2.99 | -- | -- | -0.313 | -- | -- | 0.0177 | -- | 10.5 | 1348 | -- | -- |
| 96.14 | 0.458 | 2.99 | -- | -- | -- | -- | -- | 0.00492 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.32 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 8 | 83.32 | wind | 1.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 17 | 87.87 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 21 | 88.04 | wind | 9.0 | 90 | > th | dose dependent | rect. | 1 | 9 |
| 24 | 88.89 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 28 | 88.89 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 32 | 88.96 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 33 | 88.97 | wind | 9.0 | 90 | > th | dose independent | rect. | 22 | 12 |
| 54 | 89.11 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 2 |
| 62 | 89.27 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 77 | 89.82 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 1 |
| 81 | 89.82 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 165 | 91.92 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 19 | 3 |
| 166 | 91.97 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 20 | 3 |
| 186 | 92.24 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 229 | 92.56 | humidity | 90.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 303 | 92.88 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 3 |
| 308 | 92.92 | wind | 5.0 | 10 | < th | dose independent | rect. | 23 | 12 |
| 314 | 92.94 | humidity | 90.0 | 90 | > th | dose independent | rect. | 20 | 1 |
| 315 | 92.94 | wind | 1.0 | 720 | > th | dose independent | rect. | 12 | 7 |
| 328 | 93.00 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 339 | 93.07 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 22 | 1 |
| 355 | 93.12 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 362 | 93.15 | wind | 5.0 | 10 | < th | dose dependent | rect. | 20 | 3 |
| 384 | 93.23 | wind | 7.0 | 10 | < th | dose independent | rect. | 23 | 21 |
| 396 | 93.26 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 12 |
| 403 | 93.28 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 425 | 93.32 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 434 | 93.35 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 441 | 93.35 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 447 | 93.36 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 460 | 93.38 | humidity | 80.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 465 | 93.38 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 490 | 93.41 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 4 |
| 491 | 93.41 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 495 | 93.42 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 498 | 93.42 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 522 | 93.48 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 563 | 93.52 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 3 |
| 567 | 93.52 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 3 |
| 572 | 93.53 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 573 | 93.54 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 575 | 93.54 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 598 | 93.57 | wind | 1.0 | 90 | > th | dose independent | rect. | 20 | 1 |
| 599 | 93.57 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 1 |
| 621 | 93.60 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 651 | 93.62 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 692 | 93.66 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 716 | 93.68 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 8 |
| 722 | 93.68 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 732 | 93.69 | radiation | 20.0 | 30 | < th | dose independent | rect. | 11 | 12 |
| 739 | 93.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 3 |
| 743 | 93.70 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 3 |
| 745 | 93.70 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 3 |
| 753 | 93.70 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 3 |
| 757 | 93.70 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 3 |
| 771 | 93.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 21 |
| 778 | 93.70 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 3 |
| 794 | 93.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 797 | 93.71 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 801 | 93.71 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 809 | 93.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 833 | 93.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 854 | 93.72 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 11 |
| 872 | 93.74 | temperature | 15.0 | 720 | > th | dose independent | rect. | 24 | 7 |
| 876 | 93.74 | wind | 5.0 | 10 | < th | dose independent | rect. | 23 | 17 |
| 950 | 93.79 | radiation | 40.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 952 | 93.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 21 |
| 965 | 93.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 21 |
| 969 | 93.80 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 7 |
| 974 | 93.80 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 21 |
| 989 | 93.81 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 1 |
| 992 | 93.81 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 995 | 93.81 | wind | 9.0 | 10 | < th | dose dependent | rect. | 23 | 12 |