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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0524700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF247, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0194) R2 : 0.0414
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0409) R2dN8 : 0.0535 R2N8 : 0.0414
σ : 0.366
deviance : 61.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.91 0.364 2.86 0.143 0.29 0.31 0.0237 -0.215 0.208 14.3 0.04129 274 -- --
60.08 0.361 2.87 0.119 0.264 0.295 0.104 -- 0.183 14.3 0.01932 273 -- --
59.91 0.36 2.87 0.143 0.291 0.31 -- -0.23 0.207 14.3 0.02981 273 -- --
60.2 0.361 2.87 0.141 0.292 0.312 -- -- 0.207 14.3 0.009904 273 -- --
60.35 0.362 2.87 0.115 -- 0.0801 -- -0.294 0.197 -- 14.67 303 -- --
60.56 0.365 2.87 0.0982 0.0719 -- -0.203 -- 0.191 1.19 -- -- -- --
60.73 0.365 2.87 0.105 0.072 -- -- -- 0.192 0.906 -- -- -- --
60.57 0.362 2.87 0.108 -- 0.12 -- -- 0.192 -- 47.13 375 -- --
60.72 0.363 2.87 -- 0.303 0.318 -- -- 0.195 14.3 0.02998 273 -- --
61.05 0.365 2.87 0.108 -- -- -- -- 0.193 -- -- -- -- --
61.02 0.365 2.87 -- 0.0737 -- -- -- 0.18 0.968 -- -- -- --
60.88 0.363 2.87 -- -- 0.115 -- -- 0.189 -- 57.93 365 -- --
61.36 0.366 2.87 -- -- -- -- -- 0.181 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.19 wind 9.0 1440 < th dose independent rect. 23 1
2 50.19 temperature 10.0 1440 > th dose independent rect. 23 1
5 50.19 temperature 30.0 1440 < th dose independent rect. 23 1
9 50.19 humidity 50.0 1440 > th dose independent rect. 23 1
19 50.19 atmosphere 995.0 1440 > th dose independent rect. 23 1
20 50.19 radiation 1.0 1440 < th dose independent rect. 23 1
40 50.19 temperature 10.0 1440 > th dose independent rect. 24 23
43 50.19 radiation 1.0 1440 < th dose dependent rect. 23 1
49 50.21 temperature 25.0 30 > th dose independent rect. 22 1
50 50.21 atmosphere 1005.0 30 > th dose dependent rect. 22 1
52 50.22 atmosphere 1005.0 30 > th dose independent rect. 22 1
53 50.22 temperature 20.0 30 > th dose dependent rect. 22 1
55 50.22 atmosphere 995.0 30 > th dose dependent rect. 22 1
58 50.23 wind 5.0 30 < th dose independent rect. 22 1
60 50.23 humidity 80.0 30 > th dose independent rect. 22 1
61 50.23 humidity 90.0 30 < th dose independent rect. 22 1
63 50.23 precipitation 0.1 30 < th dose independent rect. 22 1
64 50.23 temperature 10.0 30 > th dose dependent rect. 22 1
66 50.23 radiation 40.0 43200 < th dose dependent rect. 23 1
67 50.23 precipitation 0.1 30 < th dose dependent rect. 22 1
68 50.24 wind 1.0 30 > th dose independent rect. 22 1
72 50.24 temperature 10.0 30 > th dose independent rect. 22 1
74 50.24 temperature 30.0 30 < th dose independent rect. 22 1
75 50.24 humidity 50.0 30 > th dose independent rect. 22 1
79 50.24 atmosphere 1010.0 30 < th dose independent rect. 22 1
81 50.24 radiation 1.0 30 < th dose independent rect. 22 1
86 50.24 temperature 10.0 30 > th dose independent rect. 23 23
87 50.24 wind 5.0 30 < th dose dependent rect. 22 1
90 50.24 humidity 50.0 30 > th dose dependent rect. 22 1
92 50.24 radiation 1.0 30 < th dose dependent rect. 22 1
101 50.27 humidity 90.0 30 < th dose dependent rect. 22 1
105 50.29 wind 1.0 30 > th dose dependent rect. 22 1
107 50.30 temperature 30.0 30 < th dose dependent rect. 22 1
108 50.30 atmosphere 1015.0 30 < th dose dependent rect. 22 1
146 50.46 wind 9.0 30 < th dose independent rect. 23 23
159 50.53 precipitation 0.1 30 < th dose independent rect. 23 23
160 50.53 precipitation 0.1 30 < th dose dependent rect. 23 23
162 50.62 atmosphere 995.0 30 > th dose independent rect. 23 23
181 51.50 precipitation 0.1 1440 < th dose independent rect. 23 1
182 51.50 precipitation 0.1 1440 < th dose dependent rect. 23 1
196 52.64 humidity 50.0 30 > th dose independent rect. 23 23
218 54.27 atmosphere 1015.0 30 < th dose independent rect. 23 23
238 55.04 temperature 30.0 30 < th dose independent rect. 23 23
286 55.70 wind 1.0 30 > th dose independent rect. 23 23
328 56.27 wind 9.0 720 < th dose independent rect. 3 8
334 56.35 atmosphere 1015.0 720 < th dose independent rect. 3 8
337 56.37 temperature 10.0 720 > th dose independent rect. 3 8
338 56.37 atmosphere 995.0 720 > th dose independent rect. 3 8
339 56.37 temperature 10.0 720 > th dose independent rect. 11 16
344 56.46 temperature 10.0 30 > th dose dependent rect. 23 23
352 56.60 temperature 10.0 720 > th dose independent rect. 15 8
353 56.60 temperature 10.0 720 > th dose independent rect. 23 16
355 56.61 humidity 50.0 720 > th dose independent rect. 3 8
358 56.68 temperature 25.0 90 > th dose dependent rect. 21 6
372 56.77 radiation 10.0 30 < th dose dependent rect. 23 23
375 56.80 temperature 25.0 30 < th dose independent rect. 2 1
376 56.81 wind 3.0 30 < th dose independent rect. 2 1
377 56.81 humidity 80.0 30 > th dose independent rect. 2 1
378 56.81 atmosphere 1005.0 30 > th dose independent rect. 2 1
379 56.81 wind 3.0 30 < th dose dependent rect. 2 1
381 56.81 atmosphere 995.0 30 > th dose dependent rect. 2 1
389 56.83 wind 9.0 30 < th dose independent rect. 2 1
390 56.83 temperature 10.0 30 > th dose independent rect. 2 1
393 56.83 humidity 50.0 30 > th dose independent rect. 2 1
396 56.83 atmosphere 995.0 30 > th dose independent rect. 2 1
397 56.83 atmosphere 1010.0 30 < th dose independent rect. 2 1
399 56.83 radiation 1.0 30 < th dose independent rect. 2 1
404 56.83 precipitation 0.1 30 < th dose independent rect. 2 1
406 56.83 radiation 40.0 720 < th dose independent rect. 15 8
407 56.83 temperature 10.0 30 > th dose independent rect. 3 23
408 56.83 temperature 10.0 30 > th dose dependent rect. 2 1
410 56.83 radiation 1.0 30 < th dose dependent rect. 2 1
415 56.83 precipitation 0.1 30 < th dose dependent rect. 2 1
421 56.84 humidity 50.0 30 > th dose dependent rect. 2 1
442 56.95 temperature 30.0 30 < th dose dependent rect. 2 1
443 56.96 atmosphere 1015.0 30 < th dose dependent rect. 2 1
462 57.18 radiation 10.0 30 < th dose independent rect. 23 23
471 57.27 wind 1.0 30 > th dose independent rect. 2 1
474 57.28 wind 3.0 30 < th dose independent rect. 16 7
483 57.30 precipitation 0.1 720 < th dose independent rect. 3 8
489 57.30 precipitation 0.1 720 < th dose dependent rect. 3 8
491 57.32 radiation 40.0 90 < th dose dependent rect. 23 10
492 57.33 wind 9.0 720 < th dose independent rect. 15 8
499 57.35 precipitation 0.1 90 < th dose independent rect. 9 14
503 57.35 precipitation 0.1 90 < th dose dependent rect. 9 14
504 57.36 wind 9.0 90 < th dose independent rect. 23 10
505 57.36 temperature 10.0 90 > th dose independent rect. 23 10
506 57.36 humidity 50.0 90 > th dose independent rect. 23 10
507 57.36 atmosphere 995.0 90 > th dose independent rect. 23 10
508 57.36 temperature 10.0 90 > th dose independent rect. 9 14
509 57.36 atmosphere 1015.0 90 < th dose independent rect. 9 14
510 57.36 atmosphere 995.0 720 > th dose independent rect. 23 16
518 57.38 wind 9.0 30 < th dose dependent rect. 23 23
521 57.40 wind 1.0 90 > th dose independent rect. 9 14
522 57.42 precipitation 0.1 90 < th dose independent rect. 23 10
524 57.42 precipitation 0.1 90 < th dose dependent rect. 23 10
527 57.43 radiation 40.0 90 < th dose independent rect. 23 10
528 57.44 temperature 30.0 90 < th dose independent rect. 23 10
531 57.48 precipitation 0.1 720 < th dose independent rect. 15 8
534 57.48 precipitation 0.1 720 < th dose dependent rect. 15 8
570 57.54 wind 9.0 720 < th dose independent rect. 23 16
611 57.56 precipitation 0.1 720 < th dose independent rect. 23 16
627 57.56 precipitation 0.1 720 < th dose dependent rect. 23 16
639 57.60 wind 9.0 30 < th dose independent rect. 3 23
643 57.61 atmosphere 995.0 720 > th dose independent rect. 11 16
644 57.62 temperature 25.0 90 > th dose independent rect. 21 6
645 57.62 wind 9.0 90 < th dose independent rect. 9 14
656 57.66 atmosphere 995.0 720 > th dose independent rect. 15 8
663 57.70 precipitation 0.1 720 < th dose independent rect. 11 16
666 57.70 precipitation 0.1 720 < th dose dependent rect. 11 16
682 57.71 wind 9.0 720 < th dose independent rect. 11 16
696 57.74 humidity 50.0 90 > th dose dependent rect. 23 10
709 57.81 temperature 25.0 270 > th dose dependent rect. 19 1
724 57.85 atmosphere 995.0 90 > th dose independent rect. 9 14
752 57.92 wind 1.0 720 > th dose independent rect. 15 8
753 57.92 radiation 40.0 30 < th dose independent rect. 23 23
762 57.95 atmosphere 1015.0 90 < th dose independent rect. 23 10
781 57.99 wind 9.0 90 < th dose dependent rect. 23 10
854 58.06 atmosphere 1015.0 10 < th dose independent rect. 22 14
871 58.09 humidity 50.0 30 > th dose dependent rect. 23 23
878 58.11 wind 9.0 10 < th dose independent rect. 12 10
881 58.12 atmosphere 1010.0 10 < th dose independent rect. 12 10
882 58.12 radiation 40.0 90 < th dose independent rect. 23 12
884 58.12 temperature 25.0 270 > th dose dependent rect. 19 8
905 58.15 temperature 10.0 10 > th dose independent rect. 12 10
908 58.15 temperature 10.0 10 > th dose independent rect. 22 14
909 58.15 atmosphere 995.0 10 > th dose independent rect. 22 14
912 58.15 temperature 10.0 90 > th dose dependent rect. 23 10
914 58.16 humidity 50.0 90 > th dose independent rect. 9 14
920 58.17 wind 3.0 30 < th dose independent rect. 12 11
921 58.17 precipitation 0.1 30 < th dose independent rect. 22 14
923 58.17 precipitation 0.1 30 < th dose dependent rect. 22 14
930 58.18 wind 1.0 10 > th dose independent rect. 12 10
934 58.18 atmosphere 995.0 10 > th dose independent rect. 12 10
936 58.18 precipitation 0.1 10 < th dose independent rect. 12 10
941 58.18 precipitation 0.1 10 < th dose dependent rect. 12 10
950 58.20 temperature 10.0 1440 > th dose independent rect. 13 10
953 58.20 wind 9.0 10 < th dose independent rect. 22 14
955 58.20 temperature 10.0 1440 > th dose independent rect. 23 14
959 58.20 atmosphere 995.0 1440 > th dose independent rect. 23 14