Os06g0524300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0524300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.64 | 0.442 | 6.64 | 2.7 | 0.823 | -2.72 | -0.328 | 3.09 | 0.289 | 14 | 11.03 | 312 | -- | -- |
| 94.57 | 0.453 | 6.7 | 2.27 | 0.737 | -2.67 | 0.00482 | -- | 0.188 | 14.3 | 9.892 | 368 | -- | -- |
| 88.53 | 0.438 | 6.64 | 2.67 | 0.74 | -2.7 | -- | 2.91 | 0.285 | 14.3 | 7.66 | 370 | -- | -- |
| 94.39 | 0.452 | 6.7 | 2.21 | 0.767 | -2.63 | -- | -- | 0.16 | 14.2 | 10.32 | 354 | -- | -- |
| 92.54 | 0.448 | 6.64 | 2.71 | -- | -2.48 | -- | 2.36 | 0.274 | -- | 7.661 | 801 | -- | -- |
| 169.48 | 0.61 | 6.77 | 1.64 | 0.611 | -- | -0.0166 | -- | -0.222 | 9.97 | -- | -- | -- | -- |
| 169.48 | 0.61 | 6.77 | 1.64 | 0.611 | -- | -- | -- | -0.222 | 9.97 | -- | -- | -- | -- |
| 97.13 | 0.459 | 6.7 | 2.27 | -- | -2.44 | -- | -- | 0.158 | -- | 5.603 | 806 | -- | -- |
| 209.77 | 0.675 | 6.78 | -- | 0.62 | -1.6 | -- | -- | -0.212 | 12.6 | 10.99 | 312 | -- | -- |
| 191.94 | 0.647 | 6.79 | 1.63 | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
| 239.95 | 0.725 | 6.81 | -- | 0.606 | -- | -- | -- | -0.404 | 9.77 | -- | -- | -- | -- |
| 218.24 | 0.688 | 6.78 | -- | -- | -1.59 | -- | -- | -0.207 | -- | 9.919 | 708 | -- | -- |
| 261.84 | 0.755 | 6.83 | -- | -- | -- | -- | -- | -0.403 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 10 | 88.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 18 | 88.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 22 | 89.24 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 35 | 89.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 41 | 89.92 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 57 | 90.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 62 | 90.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 89 | 91.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 107 | 91.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 118 | 91.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 138 | 92.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 190 | 92.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 328 | 94.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 356 | 94.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 477 | 95.35 | temperature | 15 | 1440 | > th | dose dependent | sin | 14 | NA |
| 821 | 96.09 | temperature | 10 | 1440 | > th | dose dependent | sin | 5 | NA |
| 866 | 96.20 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 891 | 96.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 963 | 96.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |