Os06g0523600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0523600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.84 | 0.607 | 2.73 | 0.25 | 0.0983 | -0.31 | 0.0851 | 3.75 | -0.0219 | 20 | 48.77 | 961 | -- | -- |
| 175.42 | 0.617 | 2.78 | 0.343 | 0.227 | -0.364 | 0.536 | -- | -0.0621 | 20 | 67 | 2260 | -- | -- |
| 166.86 | 0.602 | 2.73 | 0.247 | 0.098 | -0.311 | -- | 3.78 | -0.0214 | 20 | 48.76 | 960 | -- | -- |
| 174.27 | 0.615 | 2.77 | 0.303 | 0.293 | -0.5 | -- | -- | 0.00936 | 20 | 74 | 2114 | -- | -- |
| 167.38 | 0.603 | 2.72 | 0.242 | -- | -0.285 | -- | 3.77 | -0.0213 | -- | 48.67 | 960 | -- | -- |
| 178.09 | 0.626 | 2.77 | 0.277 | 0.129 | -- | 0.451 | -- | -0.032 | 20.9 | -- | -- | -- | -- |
| 178.77 | 0.626 | 2.77 | 0.263 | 0.131 | -- | -- | -- | -0.0318 | 20.5 | -- | -- | -- | -- |
| 172.8 | 0.612 | 2.7 | 0.182 | -- | 0.803 | -- | -- | 0.0236 | -- | 43.04 | 534 | -- | -- |
| 176.73 | 0.619 | 2.77 | -- | 0.274 | -0.456 | -- | -- | -0.0252 | 20.1 | 75 | 2117 | -- | -- |
| 179.73 | 0.626 | 2.77 | 0.262 | -- | -- | -- | -- | -0.0331 | -- | -- | -- | -- | -- |
| 180.59 | 0.629 | 2.78 | -- | 0.13 | -- | -- | -- | -0.0611 | 20.6 | -- | -- | -- | -- |
| 168.46 | 0.604 | 2.77 | -- | -- | 1.84 | -- | -- | -0.0371 | -- | 44 | 512 | -- | -- |
| 181.54 | 0.629 | 2.77 | -- | -- | -- | -- | -- | -0.0622 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.17 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 4 | 152.17 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 68 | 152.17 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 71 | 152.17 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 136 | 152.19 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 138 | 152.23 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 149 | 158.54 | wind | 1.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 150 | 158.57 | wind | 1.0 | 270 | < th | dose dependent | rect. | 17 | 2 |
| 157 | 161.81 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 2 |
| 222 | 162.37 | humidity | 70.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 227 | 164.10 | humidity | 70.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 230 | 164.47 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 238 | 165.61 | wind | 5.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 241 | 165.74 | wind | 5.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 244 | 165.84 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 245 | 165.84 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 257 | 166.37 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 258 | 166.44 | humidity | 50.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 261 | 166.48 | wind | 5.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 263 | 166.52 | wind | 5.0 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 267 | 166.62 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 313 | 167.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 315 | 167.15 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 6 |
| 321 | 167.33 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 323 | 167.40 | wind | 3.0 | 90 | < th | dose dependent | rect. | 16 | 5 |
| 356 | 167.67 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 20 |
| 363 | 167.80 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 17 |
| 370 | 167.88 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 379 | 168.02 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 17 |
| 419 | 168.09 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 19 | 19 |
| 422 | 168.10 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 461 | 168.40 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 10 | 3 |
| 465 | 168.45 | wind | 5.0 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 495 | 168.66 | wind | 5.0 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 533 | 168.84 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 542 | 168.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 561 | 168.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 562 | 168.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 594 | 169.17 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 738 | 169.62 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 745 | 169.65 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 793 | 169.75 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 794 | 169.75 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 801 | 169.77 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 807 | 169.79 | wind | 7.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 891 | 169.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 892 | 169.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 900 | 169.96 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 12 | 13 |
| 962 | 170.10 | wind | 5.0 | 1440 | > th | dose independent | rect. | 2 | 3 |