Os06g0518100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0518100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.03 | 0.491 | -5100 | 31200 | 0.171 | -1490000 | -0.416 | 9120000 | -0.0281 | 5.84 | 995 | 10 | -- | -- |
| 101.75 | 0.473 | 3.29 | 0.0358 | 0.155 | 6.65 | -0.473 | -- | -0.0313 | 5.73 | 994.8 | 10 | -- | -- |
| 111.44 | 0.492 | -5100 | 31200 | 0.17 | -1490000 | -- | 9120000 | -0.0261 | 6.21 | 995 | 10 | -- | -- |
| 102.18 | 0.471 | 3.29 | 0.0308 | 0.155 | 6.68 | -- | -- | -0.0294 | 6.07 | 994.8 | 11 | -- | -- |
| 112.93 | 0.495 | -5100 | 31200 | -- | -1490000 | -- | 9120000 | -0.0227 | -- | 995 | 10 | -- | -- |
| 145.51 | 0.566 | 3.29 | 0.0726 | 0.0942 | -- | -0.679 | -- | -0.0456 | 5.57 | -- | -- | -- | -- |
| 146.56 | 0.567 | 3.29 | 0.0707 | 0.0985 | -- | -- | -- | -0.0423 | 7.07 | -- | -- | -- | -- |
| 103.44 | 0.474 | 3.29 | 0.0366 | -- | 6.61 | -- | -- | -0.0253 | -- | 994.8 | 11 | -- | -- |
| 102.21 | 0.471 | 3.29 | -- | 0.155 | 6.69 | -- | -- | -0.0295 | 6.06 | 994.8 | 11 | -- | -- |
| 147.07 | 0.567 | 3.29 | 0.0727 | -- | -- | -- | -- | -0.0405 | -- | -- | -- | -- | -- |
| 146.69 | 0.567 | 3.29 | -- | 0.0992 | -- | -- | -- | -0.0501 | 7.03 | -- | -- | -- | -- |
| 103.48 | 0.474 | 3.29 | -- | -- | 6.62 | -- | -- | -0.0293 | -- | 994.8 | 10 | -- | -- |
| 147.21 | 0.566 | 3.3 | -- | -- | -- | -- | -- | -0.0485 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.68 | atmosphere | 995 | 30 | > th | dose independent | sin | 6 | NA |
| 3 | 101.76 | atmosphere | 995 | 30 | < th | dose independent | rect. | 18 | 23 |
| 4 | 101.77 | atmosphere | 995 | 30 | < th | dose dependent | sin | 6 | NA |
| 5 | 101.77 | atmosphere | 995 | 30 | < th | dose dependent | rect. | 18 | 22 |
| 10 | 101.81 | atmosphere | 995 | 10 | < th | dose independent | sin | 6 | NA |
| 12 | 101.82 | atmosphere | 995 | 90 | < th | dose independent | rect. | 14 | 1 |
| 13 | 101.82 | atmosphere | 995 | 10 | < th | dose independent | rect. | 15 | 1 |
| 140 | 101.82 | atmosphere | 995 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 141 | 101.82 | atmosphere | 995 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 311 | 105.58 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 387 | 107.65 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 491 | 111.24 | atmosphere | 995 | 10 | < th | dose dependent | no | NA | NA |
| 705 | 111.81 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 1 |
| 708 | 111.91 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 731 | 114.45 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 7 |
| 771 | 116.46 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 830 | 119.40 | atmosphere | 995 | 30 | > th | dose independent | rect. | 3 | 23 |