Os06g0505700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0505700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 448.35 | 0.995 | 6.63 | 0.243 | 2.1 | -1.43 | 1.52 | -4.14 | -0.61 | 9.31 | 69.4 | 1340 | -- | -- |
| 467.55 | 1.01 | 6.59 | -0.0504 | 2.13 | -1.48 | 1.87 | -- | -0.54 | 8.76 | 65.25 | 1575 | -- | -- |
| 455.81 | 0.994 | 6.63 | 0.295 | 2.05 | -1.47 | -- | -4.02 | -0.61 | 9.31 | 69.8 | 1386 | -- | -- |
| 472.53 | 1.01 | 6.63 | -0.142 | 2.06 | -1.64 | -- | -- | -0.689 | 8.77 | 66.45 | 1580 | -- | -- |
| 696.15 | 1.23 | 6.68 | 0.31 | -- | -1.55 | -- | -3.67 | -0.609 | -- | 69.02 | 1476 | -- | -- |
| 512.56 | 1.06 | 6.6 | -0.217 | 2.06 | -- | 1.38 | -- | -0.525 | 8.99 | -- | -- | -- | -- |
| 519 | 1.07 | 6.6 | -0.167 | 2.05 | -- | -- | -- | -0.522 | 9.09 | -- | -- | -- | -- |
| 708.03 | 1.24 | 6.7 | -0.142 | -- | -1.77 | -- | -- | -0.719 | -- | 67 | 1492 | -- | -- |
| 473.07 | 1.01 | 6.63 | -- | 2.06 | -1.64 | -- | -- | -0.681 | 8.8 | 66.4 | 1580 | -- | -- |
| 760.88 | 1.29 | 6.65 | -0.172 | -- | -- | -- | -- | -0.511 | -- | -- | -- | -- | -- |
| 519.74 | 1.07 | 6.59 | -- | 2.05 | -- | -- | -- | -0.504 | 9.1 | -- | -- | -- | -- |
| 708.61 | 1.24 | 6.7 | -- | -- | -1.8 | -- | -- | -0.694 | -- | 67.87 | 1496 | -- | -- |
| 761.66 | 1.29 | 6.65 | -- | -- | -- | -- | -- | -0.492 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 416.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 2 | 416.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 3 | 418.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 4 | 423.10 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 5 | 423.14 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 9 | 426.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 10 | 427.05 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 11 | 427.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 14 | 428.45 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 15 | 428.45 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 17 | 428.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 18 | 428.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 23 | 430.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 27 | 430.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 45 | 432.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 46 | 432.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 49 | 432.95 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 53 | 433.07 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 62 | 433.89 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 63 | 434.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 98 | 436.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 99 | 436.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 100 | 436.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 104 | 436.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 114 | 436.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 138 | 438.03 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 142 | 438.10 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 158 | 438.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 175 | 439.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 176 | 439.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 184 | 439.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 198 | 439.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 199 | 439.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 201 | 439.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 214 | 439.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 221 | 440.16 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 244 | 441.16 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 248 | 441.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 251 | 441.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 253 | 441.42 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 1 | 16 |
| 257 | 441.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 299 | 442.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 309 | 442.60 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 310 | 442.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 315 | 442.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 337 | 443.04 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 14 |
| 353 | 443.21 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 358 | 443.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 14 |
| 363 | 443.37 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 15 |
| 365 | 443.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 15 |
| 373 | 443.45 | humidity | 80.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 379 | 443.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 381 | 443.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 382 | 443.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 15 |
| 397 | 443.61 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 416 | 443.83 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 435 | 444.08 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 457 | 444.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 459 | 444.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 22 | 19 |
| 470 | 444.44 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 572 | 445.52 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 592 | 445.69 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 608 | 445.79 | humidity | 80.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 659 | 446.10 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 684 | 446.21 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 800 | 447.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 814 | 447.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 859 | 447.60 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 908 | 447.96 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 11 |
| 912 | 447.99 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 920 | 448.03 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 951 | 448.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 20 |