Os06g0503100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0503100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ABC transporter related domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.87 | 0.583 | 2.91 | -0.0842 | 0.043 | 6.21 | 0.586 | -16.1 | 0.0405 | 4.47 | 0.1 | 30 | 5 | 9 |
| 172.42 | 0.612 | 2.86 | 0.0623 | 0.128 | 3.47 | 0.46 | -- | 0.157 | 2.09 | 0.09489 | 30 | 4.02 | 12.5 |
| 157.72 | 0.585 | 2.91 | -0.0876 | 0.0607 | 6.13 | -- | -15.8 | 0.0372 | 6.77 | 0.08033 | 28 | 5.65 | 9.51 |
| 161.39 | 0.592 | 2.91 | 0.00409 | 0.0241 | 4.71 | -- | -- | 0.0338 | 2.89 | 0.1436 | 3 | 4.37 | 13.1 |
| 157.92 | 0.585 | 2.92 | -0.0865 | -- | 6.17 | -- | -15.9 | 0.0385 | -- | 0.0829 | 28 | 5.64 | 9.96 |
| 182.54 | 0.633 | 2.91 | -0.0399 | 0.104 | -- | 0.393 | -- | 0.0155 | 5.47 | -- | -- | -- | -- |
| 182.83 | 0.633 | 2.91 | -0.0377 | 0.114 | -- | -- | -- | 0.0142 | 6.75 | -- | -- | -- | -- |
| 161.41 | 0.592 | 2.9 | 0.00656 | -- | 4.71 | -- | -- | 0.0343 | -- | 0.1459 | 3 | 4.62 | 13.4 |
| 161.14 | 0.591 | 2.9 | -- | 0.0729 | 4.68 | -- | -- | 0.032 | 7.24 | 0.2172 | 4 | 5.96 | 14 |
| 183.51 | 0.633 | 2.91 | -0.0352 | -- | -- | -- | -- | 0.0164 | -- | -- | -- | -- | -- |
| 182.87 | 0.633 | 2.91 | -- | 0.113 | -- | -- | -- | 0.0184 | 6.77 | -- | -- | -- | -- |
| 161.42 | 0.592 | 2.91 | -- | -- | 4.71 | -- | -- | 0.0335 | -- | 0.1476 | 3 | 4.84 | 13.7 |
| 183.55 | 0.632 | 2.91 | -- | -- | -- | -- | -- | 0.0203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.87 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 9 |
| 5 | 156.87 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 13 | 157.86 | wind | 3.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 19 | 158.29 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 20 | 158.33 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 35 | 159.21 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 36 | 159.21 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 37 | 159.33 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 14 | 2 |
| 39 | 159.34 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 2 |
| 45 | 159.42 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 61 | 159.42 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 79 | 159.55 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 95 | 159.61 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 97 | 159.66 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 218 | 162.17 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 248 | 164.74 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 268 | 166.31 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |
| 271 | 166.31 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 291 | 167.14 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 12 |
| 298 | 167.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 8 |
| 356 | 169.45 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 6 |
| 358 | 169.45 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 370 | 169.62 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 386 | 170.03 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 393 | 170.24 | wind | 3.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 402 | 170.43 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 408 | 170.62 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 409 | 170.62 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 426 | 170.84 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 444 | 170.92 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 455 | 171.04 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 515 | 171.38 | precipitation | 0.1 | 10 | < th | dose independent | sin | 0 | NA |
| 516 | 171.38 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 0 | NA |
| 623 | 172.03 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 633 | 172.11 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 672 | 172.40 | precipitation | 0.1 | 90 | > th | dose independent | sin | 5 | NA |
| 707 | 172.49 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 6 | NA |
| 727 | 172.65 | precipitation | 0.1 | 90 | < th | dose independent | sin | 6 | NA |
| 731 | 172.65 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 6 | NA |
| 755 | 172.79 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 12 |
| 761 | 172.81 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 4 |
| 812 | 173.24 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 2 |
| 840 | 173.42 | radiation | 1.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 914 | 173.85 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 4 |
| 927 | 173.90 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 15 |
| 939 | 173.96 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 12 | 1 |