Os06g0501900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0501900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.73 | 0.633 | 7.82 | 2.64 | 2.29 | -1.28 | -0.257 | -4.09 | 0.641 | 0.71 | 21.91 | 3 | -- | -- |
| 191.73 | 0.65 | 7.74 | 3.32 | 2.25 | -1.58 | 0.695 | -- | 0.826 | 0.646 | 22.88 | 7 | -- | -- |
| 181.82 | 0.633 | 7.82 | 2.69 | 2.3 | -1.3 | -- | -3.93 | 0.65 | 0.696 | 22.19 | 3 | -- | -- |
| 191.95 | 0.645 | 7.75 | 3.31 | 2.29 | -1.58 | -- | -- | 0.819 | 0.441 | 23.42 | 70 | -- | -- |
| 411.78 | 0.945 | 7.69 | 3.22 | -- | -3.34 | -- | -3.22 | 1.05 | -- | 21.05 | 2 | -- | -- |
| 229.5 | 0.71 | 7.8 | 3.04 | 2.8 | -- | 1.01 | -- | 0.596 | 1.07 | -- | -- | -- | -- |
| 233.77 | 0.716 | 7.8 | 3 | 2.79 | -- | -- | -- | 0.591 | 1.07 | -- | -- | -- | -- |
| 415.71 | 0.95 | 7.63 | 3.78 | -- | -3.55 | -- | -- | 1.21 | -- | 21.28 | 2 | -- | -- |
| 461.66 | 1.01 | 7.86 | -- | 2.57 | -0.795 | -- | -- | 0.308 | 0.917 | 25 | 81 | -- | -- |
| 718.63 | 1.25 | 7.75 | 3.11 | -- | -- | -- | -- | 0.646 | -- | -- | -- | -- | -- |
| 471.73 | 1.02 | 7.87 | -- | 2.84 | -- | -- | -- | 0.256 | 1.12 | -- | -- | -- | -- |
| 757.49 | 1.29 | 7.78 | -- | -- | -2.98 | -- | -- | 0.538 | -- | 24.4 | 3 | -- | -- |
| 973.88 | 1.46 | 7.83 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.19 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 2 | 170.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 3 | 170.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 39 | 176.91 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 59 | 178.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 62 | 178.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 110 | 181.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 17 |
| 140 | 181.91 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 17 |
| 163 | 182.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 202 | 184.24 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 216 | 184.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 220 | 184.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 222 | 184.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 272 | 185.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 289 | 186.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 291 | 186.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 329 | 187.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 339 | 187.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 390 | 188.19 | temperature | 20 | 10 | > th | dose dependent | sin | 23 | NA |
| 395 | 188.25 | temperature | 30 | 90 | < th | dose independent | rect. | 16 | 15 |
| 424 | 188.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 427 | 188.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 476 | 189.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 9 |
| 479 | 189.30 | radiation | 10 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 482 | 189.35 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 494 | 189.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 520 | 189.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 533 | 189.75 | radiation | 1 | 90 | > th | dose independent | rect. | 7 | 12 |
| 558 | 189.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 567 | 189.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 9 |
| 569 | 189.98 | radiation | 10 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 577 | 190.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 601 | 190.16 | temperature | 30 | 90 | < th | dose independent | rect. | 11 | 9 |
| 603 | 190.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 609 | 190.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 638 | 190.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 11 |
| 642 | 190.42 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 659 | 190.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 684 | 190.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 691 | 190.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 7 |
| 776 | 191.40 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 780 | 191.42 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 818 | 191.67 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 17 |
| 849 | 191.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 855 | 191.85 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 859 | 191.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 884 | 192.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 894 | 192.17 | radiation | 10 | 270 | < th | dose independent | rect. | 22 | 22 |
| 901 | 192.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 5 |
| 907 | 192.24 | radiation | 20 | 270 | < th | dose independent | rect. | 14 | 16 |
| 916 | 192.29 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 926 | 192.34 | radiation | 30 | 270 | < th | dose dependent | rect. | 13 | 17 |