Os06g0500300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0500300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.65 | 0.701 | 10.9 | -1.64 | 2.84 | -1.06 | 0.843 | -3.11 | 0.793 | 18.6 | 67.91 | 2713 | -- | -- |
| 236.33 | 0.716 | 10.9 | -1.41 | 2.87 | -1.2 | 0.665 | -- | 0.737 | 18.6 | 66 | 2679 | -- | -- |
| 224.18 | 0.697 | 10.9 | -1.65 | 2.84 | -1.02 | -- | -3.17 | 0.806 | 18.5 | 67.8 | 2798 | -- | -- |
| 237.28 | 0.717 | 10.9 | -1.39 | 2.86 | -1.32 | -- | -- | 0.809 | 18.6 | 67.6 | 2674 | -- | -- |
| 641.92 | 1.18 | 10.8 | -1.77 | -- | -1.12 | -- | -3.36 | 0.798 | -- | 68.64 | 2792 | -- | -- |
| 290.63 | 0.799 | 10.9 | -1.53 | 2.87 | -- | 0.776 | -- | 0.912 | 18.3 | -- | -- | -- | -- |
| 292.1 | 0.8 | 10.9 | -1.54 | 2.88 | -- | -- | -- | 0.915 | 18.3 | -- | -- | -- | -- |
| 657.24 | 1.19 | 10.8 | -1.45 | -- | -1.39 | -- | -- | 0.827 | -- | 68 | 2739 | -- | -- |
| 288.14 | 0.791 | 10.8 | -- | 2.86 | -1.45 | -- | -- | 1.06 | 18.6 | 68.92 | 2663 | -- | -- |
| 722.18 | 1.26 | 10.8 | -1.62 | -- | -- | -- | -- | 0.853 | -- | -- | -- | -- | -- |
| 354.77 | 0.881 | 10.8 | -- | 2.9 | -- | -- | -- | 1.09 | 18.3 | -- | -- | -- | -- |
| 711.3 | 1.24 | 10.8 | -- | -- | -1.62 | -- | -- | 0.954 | -- | 68 | 2737 | -- | -- |
| 791.28 | 1.31 | 10.8 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 181.40 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 3 | 181.55 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 12 | 183.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 14 | 184.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 16 | 184.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 17 | 184.22 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 18 | 184.22 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 21 | 184.88 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 23 | 185.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 61 | 188.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 65 | 188.78 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 109 | 191.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 127 | 192.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 152 | 193.02 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 220 | 195.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 221 | 195.84 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 259 | 196.43 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 267 | 196.64 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 285 | 196.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 348 | 198.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 375 | 198.89 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 379 | 198.97 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 484 | 200.80 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 492 | 201.00 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 504 | 201.25 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 584 | 202.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 593 | 203.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 601 | 203.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 603 | 203.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 616 | 203.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 623 | 203.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 624 | 203.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 625 | 203.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 666 | 204.74 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 674 | 204.86 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 695 | 205.17 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 709 | 205.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 712 | 205.37 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 736 | 205.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 798 | 206.74 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 842 | 207.40 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 940 | 208.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 981 | 209.39 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 1000 | 209.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 3 |