Os06g0500000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0500000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106 | 0.484 | 10.2 | 0.458 | 0.18 | -1.28 | 0.604 | -1.01 | -0.136 | 8.1 | 22.1 | 2104 | -- | -- |
| 106.59 | 0.481 | 10.2 | 0.651 | 0.228 | -1.17 | 0.768 | -- | -0.0878 | 7.49 | 22.4 | 1206 | -- | -- |
| 107 | 0.482 | 10.2 | 0.441 | 0.202 | -1.27 | -- | -1.08 | -0.147 | 8.42 | 22.11 | 1960 | -- | -- |
| 107.77 | 0.484 | 10.2 | 0.72 | 0.211 | -1.2 | -- | -- | -0.0797 | 5.76 | 22.29 | 1048 | -- | -- |
| 108.79 | 0.486 | 10.2 | 0.464 | -- | -1.32 | -- | -1.13 | -0.139 | -- | 22.05 | 2084 | -- | -- |
| 164.43 | 0.601 | 10.3 | 0.259 | 0.26 | -- | 0.736 | -- | -0.49 | 8.55 | -- | -- | -- | -- |
| 166.17 | 0.604 | 10.3 | 0.282 | 0.258 | -- | -- | -- | -0.49 | 8.69 | -- | -- | -- | -- |
| 109.3 | 0.487 | 10.2 | 0.682 | -- | -1.17 | -- | -- | -0.089 | -- | 22.2 | 968 | -- | -- |
| 118.68 | 0.507 | 10.2 | -- | 0.191 | -1.03 | -- | -- | -0.199 | 5.53 | 22.3 | 976 | -- | -- |
| 169.93 | 0.609 | 10.3 | 0.283 | -- | -- | -- | -- | -0.488 | -- | -- | -- | -- | -- |
| 168.28 | 0.607 | 10.3 | -- | 0.259 | -- | -- | -- | -0.521 | 8.61 | -- | -- | -- | -- |
| 120.01 | 0.51 | 10.2 | -- | -- | -1.02 | -- | -- | -0.205 | -- | 22.39 | 858 | -- | -- |
| 172.04 | 0.612 | 10.3 | -- | -- | -- | -- | -- | -0.519 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 106.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 28 | 108.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 32 | 108.74 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 61 | 109.33 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 62 | 109.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 95 | 109.86 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 102 | 109.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 270 | 110.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 605 | 112.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 695 | 112.65 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 717 | 112.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 732 | 112.78 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 774 | 112.91 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 798 | 113.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 808 | 113.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 822 | 113.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 871 | 113.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 933 | 113.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 977 | 113.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |