Os06g0498000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0498000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.65 | 0.321 | 8.67 | 0.55 | 0.315 | 0.214 | 0.522 | -4.97 | 0.296 | 12.1 | 30 | 1739 | -- | -- |
| 48.14 | 0.323 | 8.56 | 1.37 | 0.316 | -0.353 | 0.536 | -- | 0.368 | 12.2 | 29.74 | 1772 | -- | -- |
| 47.39 | 0.321 | 8.66 | 0.599 | 0.315 | 0.161 | -- | -4.92 | 0.287 | 12.6 | 29.9 | 2073 | -- | -- |
| 49.17 | 0.327 | 8.56 | 1.36 | 0.322 | -0.347 | -- | -- | 0.377 | 12.8 | 29.7 | 1882 | -- | -- |
| 53.22 | 0.34 | 8.67 | 0.584 | -- | 0.127 | -- | -4.86 | 0.269 | -- | 29.88 | 2164 | -- | -- |
| 52.15 | 0.339 | 8.56 | 1.27 | 0.327 | -- | 0.568 | -- | 0.387 | 12 | -- | -- | -- | -- |
| 53.46 | 0.342 | 8.56 | 1.29 | 0.328 | -- | -- | -- | 0.39 | 12.5 | -- | -- | -- | -- |
| 54.54 | 0.344 | 8.58 | 1.37 | -- | -0.393 | -- | -- | 0.34 | -- | 30.1 | 978 | -- | -- |
| 93.03 | 0.452 | 8.61 | -- | 0.232 | 0.242 | -- | -- | 0.159 | 12 | 23.5 | 1711 | -- | -- |
| 60.2 | 0.363 | 8.57 | 1.28 | -- | -- | -- | -- | 0.385 | -- | -- | -- | -- | -- |
| 97.39 | 0.462 | 8.59 | -- | 0.309 | -- | -- | -- | 0.247 | 12.3 | -- | -- | -- | -- |
| 68.83 | 0.386 | 8.66 | -- | -- | 0.977 | -- | -- | 0.0631 | -- | 16.7 | 33463 | -- | -- |
| 103.39 | 0.475 | 8.6 | -- | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.16 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 45.30 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 5 | 45.60 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 6 | 45.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 7 | 45.66 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 10 | 45.72 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 12 | 45.75 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 13 | 45.79 | temperature | 15.0 | 90 | > th | dose independent | rect. | 11 | 14 |
| 14 | 45.81 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 16 | 45.85 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 19 | 14 |
| 17 | 45.86 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 19 | 45.89 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 21 | 45.90 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 26 | 45.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 28 | 45.99 | radiation | 10.0 | 720 | < th | dose independent | rect. | 19 | 14 |
| 33 | 46.04 | temperature | 15.0 | 720 | > th | dose independent | rect. | 11 | 10 |
| 35 | 46.06 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 36 | 46.07 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 39 | 46.08 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 42 | 46.09 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 58 | 46.10 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 78 | 46.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 99 | 46.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 101 | 46.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 103 | 46.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 112 | 46.24 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 124 | 46.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 14 |
| 125 | 46.26 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 17 |
| 127 | 46.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 130 | 46.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 156 | 46.32 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 157 | 46.33 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 161 | 46.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 9 |
| 165 | 46.35 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 166 | 46.35 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 170 | 46.35 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 174 | 46.36 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 177 | 46.37 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 178 | 46.37 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 186 | 46.38 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 11 | 15 |
| 187 | 46.39 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 212 | 46.43 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 226 | 46.47 | temperature | 30.0 | 720 | > th | dose independent | sin | 8 | NA |
| 228 | 46.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 232 | 46.49 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 244 | 46.50 | temperature | 30.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 246 | 46.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 249 | 46.51 | temperature | 15.0 | 720 | > th | dose independent | rect. | 16 | 9 |
| 252 | 46.51 | radiation | 10.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 256 | 46.51 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 262 | 46.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 21 |
| 268 | 46.54 | radiation | 10.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 269 | 46.54 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 278 | 46.56 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 20 |
| 281 | 46.57 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 294 | 46.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 297 | 46.59 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 299 | 46.59 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 303 | 46.60 | temperature | 30.0 | 270 | < th | dose independent | sin | 10 | NA |
| 304 | 46.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 308 | 46.60 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 309 | 46.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 322 | 46.62 | temperature | 30.0 | 90 | < th | dose independent | rect. | 11 | 15 |
| 323 | 46.62 | temperature | 10.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 324 | 46.63 | temperature | 30.0 | 720 | < th | dose independent | sin | 5 | NA |
| 325 | 46.63 | radiation | 10.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 343 | 46.64 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 345 | 46.65 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 347 | 46.65 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 348 | 46.65 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 355 | 46.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 399 | 46.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 414 | 46.70 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 438 | 46.72 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 439 | 46.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 444 | 46.72 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 455 | 46.73 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 456 | 46.74 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 469 | 46.75 | radiation | 10.0 | 720 | < th | dose independent | rect. | 4 | 5 |
| 471 | 46.75 | temperature | 15.0 | 720 | > th | dose independent | rect. | 13 | 9 |
| 475 | 46.75 | temperature | 30.0 | 90 | < th | dose independent | rect. | 20 | 20 |
| 477 | 46.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 478 | 46.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 13 |
| 486 | 46.76 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 495 | 46.77 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 6 |
| 550 | 46.79 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 9 | 15 |
| 582 | 46.81 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 590 | 46.82 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 593 | 46.82 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 18 | NA |
| 595 | 46.82 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 625 | 46.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 638 | 46.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 3 |
| 642 | 46.85 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 653 | 46.86 | temperature | 30.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 673 | 46.88 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 676 | 46.88 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 20 | NA |
| 692 | 46.90 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 3 |
| 722 | 46.90 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 730 | 46.90 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 4 | 19 |
| 793 | 46.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 807 | 46.94 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 5 |
| 857 | 46.98 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 910 | 46.99 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 920 | 46.99 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 7 |
| 928 | 46.99 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 16 | 20 |
| 944 | 47.00 | temperature | 15.0 | 720 | > th | dose independent | rect. | 13 | 15 |
| 952 | 47.00 | temperature | 25.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 955 | 47.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 15 | 8 |
| 963 | 47.01 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 964 | 47.01 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 973 | 47.01 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 16 |
| 981 | 47.02 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 982 | 47.02 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |