Os06g0497600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0497600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.64 | 0.4 | 8.17 | -0.258 | 0.543 | -1.37 | -1.99 | 4.45 | 0.488 | 14.6 | 14.9 | 275 | -- | -- |
| 83.54 | 0.426 | 8.26 | -0.934 | 0.16 | -1.15 | -1.29 | -- | 0.293 | 14.1 | 12.82 | 838 | -- | -- |
| 76.7 | 0.408 | 8.17 | -0.186 | 0.133 | -1.19 | -- | 4.03 | 0.494 | 13.7 | -1.62 | 921 | -- | -- |
| 85.02 | 0.429 | 8.21 | -0.561 | 0.304 | -1.17 | -- | -- | 0.484 | 11.7 | -28.4 | 10773 | -- | -- |
| 77.68 | 0.41 | 8.16 | -0.153 | -- | -1.25 | -- | 4.03 | 0.508 | -- | 8.944 | 959 | -- | -- |
| 103 | 0.476 | 8.3 | -1.23 | 0.306 | -- | -1.17 | -- | 0.111 | 12.8 | -- | -- | -- | -- |
| 108.36 | 0.487 | 8.3 | -1.28 | 0.318 | -- | -- | -- | 0.103 | 11.7 | -- | -- | -- | -- |
| 89.42 | 0.44 | 8.22 | -0.588 | -- | -1.23 | -- | -- | 0.485 | -- | 9.024 | 9616 | -- | -- |
| 88.36 | 0.438 | 8.16 | -- | 0.279 | -1.48 | -- | -- | 0.718 | 11.5 | -25.32 | 14114 | -- | -- |
| 114.72 | 0.5 | 8.31 | -1.29 | -- | -- | -- | -- | 0.0995 | -- | -- | -- | -- | -- |
| 151.46 | 0.576 | 8.27 | -- | 0.334 | -- | -- | -- | 0.246 | 11.9 | -- | -- | -- | -- |
| 93.11 | 0.449 | 8.17 | -- | -- | -1.51 | -- | -- | 0.721 | -- | -29.64 | 13989 | -- | -- |
| 158.48 | 0.588 | 8.28 | -- | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.43 | temperature | 10.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 5 | 64.73 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 6 | 64.74 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 8 | 65.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 16 |
| 13 | 65.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 8 |
| 19 | 65.57 | temperature | 30.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 42 | 66.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 85 | 67.07 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 94 | 67.22 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 103 | 67.35 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 118 | 67.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 134 | 67.72 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 143 | 67.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 145 | 67.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 150 | 67.88 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 152 | 67.92 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 162 | 68.01 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 166 | 68.07 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 189 | 68.29 | temperature | 10.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 203 | 68.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 207 | 68.48 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 212 | 68.50 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 223 | 68.59 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 225 | 68.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 231 | 68.65 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 245 | 68.71 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 273 | 68.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 274 | 68.94 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 290 | 69.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 294 | 69.05 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 305 | 69.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 310 | 69.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 318 | 69.17 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 322 | 69.19 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 347 | 69.31 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 359 | 69.36 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 364 | 69.40 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 366 | 69.40 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 389 | 69.46 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 392 | 69.46 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 10 |
| 401 | 69.50 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 411 | 69.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 440 | 69.62 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 441 | 69.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 576 | 70.00 | humidity | 50.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 626 | 70.10 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 628 | 70.11 | humidity | 50.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 668 | 70.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 747 | 70.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 755 | 70.31 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 21 | NA |
| 816 | 70.43 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 8 |
| 862 | 70.48 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 871 | 70.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 877 | 70.51 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 885 | 70.52 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 11 |
| 889 | 70.52 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 929 | 70.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 947 | 70.59 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 23 | 18 |
| 991 | 70.66 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |