Os06g0495700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0495700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.57 | 0.276 | 7.66 | 1.28 | 0.307 | -1.97 | 0.424 | 1.18 | 0.166 | 1.88 | 15.14 | 721 | -- | -- |
| 35.53 | 0.278 | 7.68 | 1.08 | 0.281 | -2.02 | 0.573 | -- | 0.117 | 1.24 | 14.43 | 703 | -- | -- |
| 35.16 | 0.276 | 7.66 | 1.31 | 0.338 | -1.92 | -- | 1.38 | 0.166 | 2.47 | 15.37 | 741 | -- | -- |
| 36.48 | 0.281 | 7.68 | 1.07 | 0.449 | -1.89 | -- | -- | 0.0981 | 3.22 | 14.7 | 859 | -- | -- |
| 36.18 | 0.28 | 7.66 | 1.24 | -- | -2.03 | -- | 1.33 | 0.162 | -- | 14.83 | 481 | -- | -- |
| 85.1 | 0.432 | 7.74 | 0.557 | 0.537 | -- | -0.143 | -- | -0.201 | 6.28 | -- | -- | -- | -- |
| 85.15 | 0.432 | 7.74 | 0.555 | 0.536 | -- | -- | -- | -0.201 | 6.21 | -- | -- | -- | -- |
| 37.41 | 0.285 | 7.69 | 1.01 | -- | -2.03 | -- | -- | 0.1 | -- | 13.55 | 457 | -- | -- |
| 61.79 | 0.366 | 7.72 | -- | 0.148 | -1.4 | -- | -- | -0.0679 | 4.08 | 16.96 | 521 | -- | -- |
| 100.07 | 0.467 | 7.75 | 0.57 | -- | -- | -- | -- | -0.189 | -- | -- | -- | -- | -- |
| 93.26 | 0.452 | 7.76 | -- | 0.544 | -- | -- | -- | -0.262 | 6.16 | -- | -- | -- | -- |
| 61.76 | 0.366 | 7.72 | -- | -- | -1.35 | -- | -- | -0.0588 | -- | 19.48 | 434 | -- | -- |
| 108.63 | 0.486 | 7.77 | -- | -- | -- | -- | -- | -0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.72 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 4 | 33.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 25 | 34.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 36 | 34.57 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 41 | 34.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 53 | 34.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 76 | 35.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 82 | 35.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 87 | 35.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 116 | 35.30 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 150 | 35.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 181 | 35.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 201 | 35.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 222 | 36.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 301 | 36.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 313 | 36.78 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 325 | 36.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 327 | 36.87 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 334 | 36.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 407 | 37.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 408 | 37.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 414 | 37.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 17 |
| 475 | 37.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 502 | 37.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 643 | 37.87 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 801 | 38.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |