Os06g0494100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os06g0494100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.25 | 0.424 | 10.3 | 0.0242 | 1.63 | 2.53 | -0.632 | -0.166 | -0.155 | 23.2 | 3.088 | 722 | -- | -- |
| 81.29 | 0.42 | 10.3 | 0.0183 | 1.63 | 2.49 | -0.639 | -- | -0.154 | 23.3 | 3.159 | 721 | -- | -- |
| 82.96 | 0.424 | 10.3 | 0.0537 | 1.64 | 2.58 | -- | -0.142 | -0.151 | 23.1 | 3.01 | 721 | -- | -- |
| 82.98 | 0.424 | 10.3 | 0.0566 | 1.64 | 2.6 | -- | -- | -0.154 | 23.1 | 2.711 | 721 | -- | -- |
| 97.08 | 0.459 | 10.2 | -0.0536 | -- | 2.28 | -- | -0.00621 | -0.146 | -- | 5.621 | 413 | -- | -- |
| 95.68 | 0.459 | 10.3 | -0.119 | 2.42 | -- | -0.482 | -- | -0.274 | 2.91 | -- | -- | -- | -- |
| 96.47 | 0.46 | 10.3 | -0.108 | 2.41 | -- | -- | -- | -0.271 | 2.92 | -- | -- | -- | -- |
| 95.69 | 0.456 | 10.3 | 0.0175 | -- | 2.17 | -- | -- | -0.181 | -- | 2.715 | 407 | -- | -- |
| 83.06 | 0.424 | 10.3 | -- | 1.62 | 2.57 | -- | -- | -0.159 | 23.1 | 2.78 | 717 | -- | -- |
| 432.47 | 0.972 | 10.3 | -0.00533 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 96.78 | 0.46 | 10.3 | -- | 2.41 | -- | -- | -- | -0.259 | 2.92 | -- | -- | -- | -- |
| 95.7 | 0.456 | 10.3 | -- | -- | 2.18 | -- | -- | -0.183 | -- | 2.73 | 407 | -- | -- |
| 432.47 | 0.971 | 10.3 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.28 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 3 |
| 2 | 72.78 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 3 | 73.30 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 12 |
| 6 | 74.81 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 8 | 75.45 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 9 | 75.65 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 6 |
| 11 | 75.73 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 12 |
| 12 | 75.84 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 13 | 75.85 | radiation | 10 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 17 | 76.52 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 43 | 77.46 | radiation | 10 | 720 | < th | dose dependent | sin | 15 | NA |
| 111 | 78.98 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 6 |
| 115 | 79.07 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 20 |
| 117 | 79.09 | radiation | 1 | 720 | < th | dose independent | rect. | 24 | 20 |
| 138 | 79.42 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 15 |
| 161 | 79.58 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 19 |
| 164 | 79.60 | radiation | 1 | 720 | < th | dose independent | rect. | 6 | 14 |
| 167 | 79.62 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 13 |
| 171 | 79.64 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 10 |
| 178 | 79.74 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 202 | 80.03 | radiation | 10 | 720 | > th | dose independent | sin | 14 | NA |
| 220 | 80.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 223 | 80.21 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 232 | 80.29 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 7 |
| 260 | 80.40 | radiation | 1 | 720 | < th | dose independent | rect. | 6 | 23 |
| 270 | 80.48 | radiation | 1 | 720 | < th | dose independent | rect. | 6 | 21 |
| 271 | 80.48 | radiation | 1 | 720 | < th | dose dependent | sin | 0 | NA |
| 443 | 81.22 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 444 | 81.22 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 468 | 81.27 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 475 | 81.30 | radiation | 10 | 720 | < th | dose independent | sin | 15 | NA |
| 525 | 81.55 | radiation | 1 | 720 | < th | dose independent | sin | 13 | NA |
| 528 | 81.55 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 545 | 81.60 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 590 | 81.75 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 18 |
| 594 | 81.76 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 21 |
| 641 | 81.89 | radiation | 1 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 652 | 81.94 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 6 |
| 667 | 81.95 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 668 | 81.95 | radiation | 1 | 720 | > th | dose independent | rect. | 4 | 15 |
| 713 | 81.95 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 716 | 81.96 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 752 | 82.02 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 759 | 82.03 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 13 |
| 762 | 82.04 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 10 |
| 763 | 82.04 | radiation | 10 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 791 | 82.10 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 796 | 82.11 | humidity | 70 | 720 | < th | dose independent | sin | 14 | NA |
| 803 | 82.12 | humidity | 70 | 720 | > th | dose independent | rect. | 10 | 10 |
| 805 | 82.12 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 22 |
| 818 | 82.14 | radiation | 1 | 720 | < th | dose independent | sin | 18 | NA |
| 840 | 82.16 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 21 |
| 856 | 82.17 | radiation | 1 | 720 | > th | dose dependent | rect. | 14 | 5 |
| 877 | 82.18 | humidity | 90 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 879 | 82.19 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 917 | 82.26 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 12 |