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Os06g0493100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0572) R2 : 0.595
β1 : 5.14 (0.21) R2dD : 0.613 R2D : 0.41
β2 : 0.744 (0.138) R2dC : 0.0253 R2C : 0.0184
β3 : 2.3 (0.222) R2dE : 0.159 R2E : -0.092
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.12 (0.793) R2dD*E : 0.0339 R2D*E : 0.00696
γ1 : 0.731 (0.12) R2dN8 : 0.0468 R2N8 : -0.037
σ : 1.01
deviance : 469.89
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C
peak time of C : 19.7
E
wheather : wind
threshold : 5.177
memory length : 5726
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 17.6
open length of G : 2.64

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
474.65 1.02 11.8 5.13 0.73 2.24 1.13 4.05 0.737 20.1 5.108 5753 17.3 3.95
499.9 1.04 11.8 5.06 0.768 2.22 0.682 -- 0.718 19.7 5.401 5726 17.7 2.87
469.89 1.01 11.8 5.14 0.744 2.3 -- 4.12 0.731 19.7 5.177 5726 17.6 2.64
497.23 1.04 11.7 5.08 0.747 2.12 -- -- 0.829 18.9 5.3 5288 18.2 3.02
492.83 1.03 11.8 5.06 -- 2.51 -- 4.74 0.687 -- 5.216 5152 17.6 2.65
608.32 1.16 11.8 4.48 0.704 -- 1.12 -- 0.541 20.2 -- -- -- --
612.14 1.16 11.8 4.45 0.707 -- -- -- 0.543 20 -- -- -- --
520.41 1.06 11.7 4.81 -- 1.96 -- -- 0.85 -- 5.356 5280 18.3 2.63
987.73 1.46 11.6 -- 0.441 2.75 -- -- 0.683 19.5 8.956 4561 18.6 1.91
639.48 1.18 11.8 4.44 -- -- -- -- 0.534 -- -- -- -- --
1134.33 1.58 11.9 -- 0.684 -- -- -- 0.0468 20.5 -- -- -- --
989.91 1.47 11.7 -- -- 2.67 -- -- 0.583 -- 9.801 5150 18.6 1.86
1160.56 1.59 11.9 -- -- -- -- -- 0.0406 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 415.92 wind 9.0 43200 > th dose independent rect. 15 16
2 416.01 wind 9.0 43200 < th dose independent rect. 15 16
12 419.24 wind 7.0 43200 > th dose dependent rect. 15 15
14 419.67 wind 9.0 43200 < th dose independent rect. 15 9
15 419.77 wind 9.0 43200 < th dose independent rect. 15 11
24 420.91 wind 9.0 43200 > th dose dependent rect. 15 5
26 421.29 wind 9.0 43200 > th dose independent rect. 15 11
28 421.76 wind 9.0 43200 > th dose independent rect. 15 9
52 425.53 wind 9.0 43200 < th dose independent rect. 15 5
61 427.07 wind 9.0 43200 > th dose independent rect. 15 5
76 429.05 wind 9.0 43200 > th dose independent rect. 15 3
81 429.60 wind 7.0 43200 > th dose independent sin 13 NA
86 429.80 wind 7.0 43200 < th dose independent sin 13 NA
102 430.68 wind 7.0 43200 > th dose dependent sin 13 NA
208 438.44 wind 9.0 43200 < th dose independent rect. 17 2
266 440.96 wind 7.0 43200 > th dose dependent rect. 17 1
290 441.72 wind 9.0 43200 > th dose independent rect. 12 20
300 441.99 precipitation 0.1 43200 > th dose dependent rect. 20 1
362 444.00 wind 9.0 43200 < th dose independent rect. 11 13
380 444.36 precipitation 0.1 43200 > th dose dependent rect. 16 5
558 447.55 wind 7.0 43200 > th dose dependent rect. 21 23
560 447.61 precipitation 0.1 43200 > th dose dependent rect. 15 3
567 447.70 wind 7.0 43200 > th dose dependent rect. 1 23
599 448.01 wind 7.0 43200 > th dose dependent no NA NA
609 448.14 wind 7.0 43200 > th dose dependent rect. 3 23
622 448.30 wind 7.0 43200 > th dose independent rect. 21 23
635 448.39 wind 9.0 43200 < th dose independent rect. 4 19
636 448.39 wind 9.0 43200 < th dose independent rect. 1 22
637 448.41 wind 9.0 43200 < th dose independent rect. 20 23
654 448.55 wind 7.0 43200 > th dose independent rect. 1 23
659 448.62 wind 9.0 43200 < th dose independent rect. 4 22
693 448.88 wind 7.0 43200 > th dose independent no NA NA
696 448.91 wind 9.0 43200 < th dose independent no NA NA
740 449.22 wind 9.0 43200 < th dose independent rect. 11 9
745 449.24 wind 9.0 43200 > th dose independent rect. 4 19
923 450.96 wind 7.0 43200 > th dose independent rect. 18 23
939 451.31 wind 7.0 43200 > th dose independent rect. 19 1