Os06g0489200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : D111/G-patch domain containing protein.
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Os06g0489200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : D111/G-patch domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.13 | 0.312 | 6.74 | 1.02 | 0.564 | 0.532 | -0.0937 | 0.691 | 0.147 | 9.92 | 25 | 11 | -- | -- |
| 44.25 | 0.312 | 6.75 | 0.941 | 0.555 | 0.594 | -0.0376 | -- | 0.126 | 9.87 | 25 | 11 | -- | -- |
| 44.07 | 0.312 | 6.74 | 1.01 | 0.561 | 0.534 | -- | 0.646 | 0.147 | 9.94 | 25 | 11 | -- | -- |
| 44.26 | 0.312 | 6.75 | 0.94 | 0.555 | 0.592 | -- | -- | 0.126 | 9.88 | 25 | 11 | -- | -- |
| 61.73 | 0.368 | 6.77 | 0.912 | -- | 0.784 | -- | 0.0424 | 0.102 | -- | 24.6 | 8 | -- | -- |
| 49.6 | 0.33 | 6.74 | 1.02 | 0.655 | -- | 0.0998 | -- | 0.174 | 11.2 | -- | -- | -- | -- |
| 49.65 | 0.33 | 6.74 | 1.03 | 0.655 | -- | -- | -- | 0.174 | 11.2 | -- | -- | -- | -- |
| 61.73 | 0.368 | 6.77 | 0.907 | -- | 0.787 | -- | -- | 0.101 | -- | 24.6 | 5 | -- | -- |
| 66.35 | 0.379 | 6.78 | -- | 0.549 | 0.847 | -- | -- | -0.00847 | 9.05 | 24.46 | 18 | -- | -- |
| 76.45 | 0.409 | 6.75 | 1.01 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 77.49 | 0.412 | 6.76 | -- | 0.645 | -- | -- | -- | 0.0598 | 11.1 | -- | -- | -- | -- |
| 82.66 | 0.423 | 6.8 | -- | -- | 0.901 | -- | -- | -0.0459 | -- | 23.32 | 2 | -- | -- |
| 103.46 | 0.475 | 6.78 | -- | -- | -- | -- | -- | 0.0562 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.11 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 14 |
| 3 | 43.36 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 4 | 43.36 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 12 | 43.51 | temperature | 25 | 30 | > th | dose dependent | sin | 3 | NA |
| 17 | 43.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 18 |
| 30 | 43.74 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 38 | 43.82 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 46 | 43.87 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 73 | 44.08 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 80 | 44.13 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 82 | 44.13 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 88 | 44.14 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 95 | 44.15 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 126 | 44.25 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 174 | 44.34 | temperature | 30 | 270 | < th | dose independent | sin | 6 | NA |
| 300 | 44.61 | temperature | 30 | 270 | > th | dose independent | sin | 5 | NA |
| 321 | 44.66 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 1 |
| 332 | 44.71 | temperature | 25 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 399 | 44.89 | temperature | 30 | 90 | < th | dose independent | rect. | 11 | 8 |
| 404 | 44.90 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 7 |
| 436 | 44.94 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 510 | 44.99 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 537 | 45.03 | temperature | 25 | 90 | > th | dose dependent | rect. | 24 | 11 |
| 550 | 45.06 | temperature | 30 | 90 | > th | dose independent | sin | 2 | NA |
| 630 | 45.12 | temperature | 25 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 632 | 45.13 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 9 |
| 641 | 45.14 | temperature | 30 | 30 | < th | dose independent | rect. | 11 | 23 |
| 673 | 45.18 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 708 | 45.20 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 11 |
| 740 | 45.22 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 752 | 45.24 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 753 | 45.24 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 768 | 45.25 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 818 | 45.31 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 819 | 45.31 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 11 | 23 |
| 880 | 45.37 | temperature | 30 | 10 | > th | dose independent | rect. | 9 | 7 |