Os06g0483500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0483500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.05 | 0.53 | 13 | -0.167 | 2.31 | -0.918 | 1.2 | -1.95 | -1.64 | 19 | 0.08522 | 17183 | -- | -- |
| 133.52 | 0.538 | 13 | -0.261 | 2.36 | -1.02 | 1.01 | -- | -1.71 | 19 | 0.2853 | 17242 | -- | -- |
| 130.8 | 0.533 | 13 | -0.198 | 2.31 | -0.926 | -- | -1.9 | -1.64 | 19 | 0.09721 | 17175 | -- | -- |
| 135.07 | 0.541 | 13 | 0.0879 | 2.26 | -1.01 | -- | -- | -1.61 | 19.2 | 0.7778 | 20532 | -- | -- |
| 411.25 | 0.944 | 12.9 | -0.242 | -- | -0.868 | -- | -2.08 | -1.65 | -- | 0.3104 | 16837 | -- | -- |
| 159.31 | 0.592 | 12.9 | -0.363 | 2.3 | -- | 1.19 | -- | -1.46 | 19.1 | -- | -- | -- | -- |
| 163.05 | 0.598 | 12.9 | -0.387 | 2.31 | -- | -- | -- | -1.45 | 19.1 | -- | -- | -- | -- |
| 416.48 | 0.95 | 12.9 | 0.134 | -- | -1.22 | -- | -- | -1.58 | -- | 0.9991 | 19646 | -- | -- |
| 134.98 | 0.541 | 13 | -- | 2.28 | -1.07 | -- | -- | -1.62 | 19.1 | 0.5 | 20547 | -- | -- |
| 443.75 | 0.984 | 12.9 | -0.431 | -- | -- | -- | -- | -1.49 | -- | -- | -- | -- | -- |
| 167 | 0.605 | 12.9 | -- | 2.31 | -- | -- | -- | -1.41 | 19.1 | -- | -- | -- | -- |
| 416.62 | 0.951 | 12.9 | -- | -- | -1.16 | -- | -- | -1.58 | -- | 1 | 19678 | -- | -- |
| 448.64 | 0.989 | 12.9 | -- | -- | -- | -- | -- | -1.45 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.41 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 2 | 124.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 3 | 124.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 5 | 124.70 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 6 | 124.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 7 | 124.76 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 8 | 124.76 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 15 | 124.90 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 17 | 124.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 18 | 124.96 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 26 | 125.15 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 27 | 125.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 29 | 125.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 33 | 125.42 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 42 | 125.78 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 44 | 125.81 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 53 | 126.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 79 | 126.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 81 | 126.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 84 | 126.81 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 93 | 126.90 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 119 | 127.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 131 | 127.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 142 | 127.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 143 | 127.36 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 154 | 127.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 157 | 127.46 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 9 | 10 |
| 167 | 127.52 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 177 | 127.54 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 200 | 127.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 237 | 127.82 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 238 | 127.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 20 |
| 239 | 127.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 241 | 127.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 244 | 127.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 254 | 127.87 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 269 | 127.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 275 | 127.94 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 278 | 127.96 | humidity | 90.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 305 | 128.04 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 310 | 128.06 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 311 | 128.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 320 | 128.08 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 328 | 128.10 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 337 | 128.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 388 | 128.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 391 | 128.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 401 | 128.31 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 450 | 128.40 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 9 |
| 454 | 128.41 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 469 | 128.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 474 | 128.46 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 481 | 128.47 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 499 | 128.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 589 | 128.70 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 666 | 128.85 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 711 | 128.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 857 | 129.16 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 925 | 129.28 | humidity | 80.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 975 | 129.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 995 | 129.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 1000 | 129.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |