Os06g0475500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0475500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.31 | 0.388 | 9.42 | -0.961 | 0.942 | -2.38 | 0.0279 | 1.04 | -0.0377 | 18.6 | 31.12 | 1453 | -- | -- |
| 69.03 | 0.387 | 9.4 | -0.74 | 0.918 | -2.46 | 0.000476 | -- | -0.0426 | 18.6 | 28.64 | 1500 | -- | -- |
| 68.31 | 0.385 | 9.42 | -0.963 | 0.942 | -2.38 | -- | 1.04 | -0.0375 | 18.5 | 31.15 | 1453 | -- | -- |
| 69 | 0.387 | 9.41 | -0.76 | 0.923 | -2.49 | -- | -- | -0.0468 | 18.7 | 28.34 | 1501 | -- | -- |
| 76.07 | 0.406 | 9.4 | -0.943 | -- | -2.91 | -- | 1.73 | -0.00406 | -- | 47 | 562 | -- | -- |
| 163.64 | 0.6 | 9.28 | 0.0355 | 0.886 | -- | 0.19 | -- | 0.515 | 18.9 | -- | -- | -- | -- |
| 163.73 | 0.599 | 9.28 | 0.0323 | 0.887 | -- | -- | -- | 0.515 | 18.9 | -- | -- | -- | -- |
| 78.36 | 0.412 | 9.36 | -0.651 | -- | -2.87 | -- | -- | 0.0786 | -- | 56.34 | 576 | -- | -- |
| 81.36 | 0.42 | 9.37 | -- | 0.955 | -2.08 | -- | -- | 0.153 | 18.5 | 31.1 | 1415 | -- | -- |
| 204.99 | 0.669 | 9.27 | 0.0134 | -- | -- | -- | -- | 0.499 | -- | -- | -- | -- | -- |
| 163.76 | 0.599 | 9.28 | -- | 0.887 | -- | -- | -- | 0.512 | 18.9 | -- | -- | -- | -- |
| 88.46 | 0.438 | 9.34 | -- | -- | -2.64 | -- | -- | 0.18 | -- | 67.09 | 550 | -- | -- |
| 205 | 0.668 | 9.27 | -- | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 8 | 65.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 14 | 65.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 15 | 65.20 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 55 | 65.62 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 117 | 65.97 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 368 | 67.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 20 |
| 511 | 68.47 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 517 | 68.50 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 522 | 68.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 527 | 68.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 540 | 68.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 561 | 68.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 685 | 69.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 843 | 69.41 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 879 | 69.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 3 |