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Os06g0474900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.54 (0.0204) R2 : 0.159
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.398 (0.0429) R2dN8 : 0.205 R2N8 : 0.159
σ : 0.384
deviance : 67.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.91 0.297 9.56 -0.699 0.541 -0.508 0.32 -0.174 0.231 6.47 25.09 16 -- --
39.95 0.297 9.57 -0.721 0.538 -0.489 0.31 -- 0.227 6.51 25.1 19 -- --
40.15 0.297 9.56 -0.694 0.54 -0.496 -- -0.147 0.231 6.51 25.09 16 -- --
40.19 0.297 9.57 -0.716 0.539 -0.484 -- -- 0.227 6.53 25.1 19 -- --
54.5 0.346 9.57 -0.667 -- -0.546 -- -0.268 0.268 -- 23.28 9 -- --
43.54 0.309 9.54 -0.608 0.527 -- 0.249 -- 0.324 7.22 -- -- -- --
43.7 0.31 9.54 -0.603 0.527 -- -- -- 0.323 7.24 -- -- -- --
54.61 0.346 9.57 -0.698 -- -0.509 -- -- 0.261 -- 23.44 4 -- --
52.51 0.339 9.54 -- 0.523 -0.216 -- -- 0.353 7 25.1 19 -- --
58.42 0.357 9.56 -0.593 -- -- -- -- 0.332 -- -- -- -- --
53.28 0.341 9.53 -- 0.521 -- -- -- 0.39 7.31 -- -- -- --
66.56 0.381 9.55 -- -- -0.272 -- -- 0.367 -- 23.3 3 -- --
67.7 0.384 9.54 -- -- -- -- -- 0.398 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.43 temperature 25.0 10 < th dose dependent rect. 22 16
9 39.47 temperature 25.0 10 < th dose dependent rect. 22 20
39 39.58 temperature 20.0 10 > th dose independent rect. 20 20
55 39.63 temperature 25.0 10 < th dose dependent rect. 9 22
65 39.66 temperature 20.0 10 > th dose dependent rect. 20 10
82 39.69 temperature 20.0 10 > th dose independent rect. 18 22
91 39.71 temperature 25.0 10 < th dose dependent rect. 17 22
121 39.82 temperature 25.0 10 < th dose dependent rect. 17 19
129 39.84 temperature 25.0 30 < th dose dependent sin 8 NA
145 39.87 precipitation 0.1 4320 > th dose dependent rect. 5 4
149 39.88 precipitation 0.1 4320 > th dose independent rect. 5 4
156 39.89 temperature 20.0 10 < th dose independent rect. 22 16
158 39.89 humidity 80.0 14400 < th dose dependent rect. 6 1
162 39.90 temperature 20.0 10 < th dose independent rect. 22 14
169 39.91 precipitation 0.1 4320 < th dose independent rect. 5 4
172 39.91 precipitation 0.1 4320 < th dose dependent rect. 5 4
184 39.92 temperature 25.0 10 < th dose dependent no NA NA
188 39.92 temperature 25.0 10 < th dose dependent rect. 13 23
193 39.93 precipitation 0.1 4320 < th dose independent rect. 4 13
194 39.93 temperature 20.0 10 < th dose independent rect. 17 21
198 39.93 precipitation 0.1 4320 < th dose dependent rect. 4 13
200 39.93 temperature 25.0 30 < th dose dependent rect. 3 23
205 39.94 humidity 80.0 14400 < th dose independent rect. 6 1
206 39.94 humidity 80.0 14400 > th dose independent rect. 5 2
207 39.94 temperature 20.0 10 > th dose independent rect. 20 12
218 39.94 temperature 25.0 10 < th dose dependent rect. 11 23
220 39.95 humidity 80.0 1440 < th dose independent rect. 11 2
221 39.95 temperature 20.0 10 > th dose independent rect. 20 10
222 39.95 temperature 20.0 10 < th dose independent rect. 17 19
231 39.96 precipitation 0.1 4320 > th dose independent rect. 4 13
232 39.96 temperature 20.0 10 < th dose independent rect. 20 18
236 39.96 precipitation 0.1 4320 > th dose dependent rect. 4 13
238 39.96 temperature 25.0 30 < th dose dependent rect. 1 23
240 39.97 wind 3.0 14400 < th dose independent rect. 20 9
243 39.97 temperature 20.0 10 > th dose independent rect. 13 23
252 39.98 temperature 20.0 10 < th dose independent rect. 20 16
259 39.98 temperature 25.0 10 < th dose dependent rect. 5 23
284 40.01 humidity 90.0 4320 > th dose independent rect. 13 1
290 40.02 temperature 20.0 10 > th dose independent rect. 9 23
302 40.03 temperature 25.0 10 < th dose dependent rect. 22 9
319 40.05 humidity 80.0 1440 > th dose independent rect. 11 1
323 40.05 temperature 20.0 10 < th dose independent rect. 22 21
350 40.07 wind 3.0 14400 > th dose independent rect. 20 9
371 40.08 temperature 30.0 720 < th dose dependent rect. 21 4
381 40.09 temperature 20.0 10 < th dose independent sin 8 NA
394 40.10 temperature 20.0 30 < th dose independent rect. 9 22
409 40.11 precipitation 0.1 4320 > th dose independent rect. 4 10
427 40.12 temperature 20.0 10 < th dose independent rect. 20 23
453 40.14 temperature 20.0 10 > th dose independent sin 8 NA
454 40.14 temperature 20.0 10 > th dose independent no NA NA
481 40.15 precipitation 0.1 4320 > th dose dependent rect. 4 9
500 40.16 temperature 20.0 10 > th dose independent rect. 23 23
501 40.16 humidity 70.0 1440 > th dose dependent rect. 11 1
570 40.19 temperature 20.0 10 < th dose independent rect. 5 23
588 40.20 precipitation 0.1 4320 > th dose independent rect. 7 1
589 40.20 precipitation 0.1 4320 < th dose independent rect. 7 1
591 40.20 humidity 80.0 720 < th dose independent rect. 5 12
600 40.20 temperature 25.0 720 < th dose dependent rect. 23 1
601 40.20 precipitation 0.1 4320 > th dose dependent rect. 7 1
602 40.20 precipitation 0.1 4320 < th dose dependent rect. 7 1
613 40.21 temperature 20.0 10 < th dose independent no NA NA
618 40.21 temperature 20.0 10 < th dose independent rect. 22 9
620 40.21 humidity 80.0 720 < th dose independent rect. 7 10
624 40.21 temperature 20.0 10 < th dose independent rect. 13 23
665 40.23 temperature 20.0 10 < th dose independent rect. 3 23
666 40.23 temperature 20.0 10 < th dose independent rect. 11 23
748 40.29 temperature 20.0 30 < th dose independent rect. 17 14
752 40.29 temperature 20.0 10 < th dose independent rect. 1 23
759 40.29 precipitation 0.1 4320 > th dose dependent rect. 14 3
790 40.31 wind 3.0 14400 < th dose independent rect. 24 5
816 40.32 temperature 20.0 10 < th dose independent rect. 20 11
834 40.33 humidity 80.0 720 < th dose independent rect. 8 1
850 40.33 temperature 20.0 10 > th dose independent rect. 7 23
858 40.33 atmosphere 995.0 10 > th dose dependent rect. 22 22
876 40.35 wind 3.0 14400 < th dose independent rect. 2 2
922 40.37 temperature 25.0 10 < th dose dependent rect. 17 14
928 40.38 wind 3.0 14400 > th dose independent rect. 24 5
974 40.40 precipitation 0.1 4320 > th dose dependent rect. 16 1
998 40.41 humidity 90.0 4320 > th dose dependent rect. 8 1