Os06g0474200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0474200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.19 | 0.262 | 11.5 | 0.403 | 0.862 | 0.405 | -0.0643 | 0.296 | 0.295 | 17 | 2.51 | 30 | -- | -- |
| 31.55 | 0.264 | 11.4 | 0.403 | 0.826 | 0.426 | -0.214 | -- | 0.302 | 16.8 | 3.554 | 29 | -- | -- |
| 31.2 | 0.26 | 11.5 | 0.403 | 0.861 | 0.406 | -- | 0.305 | 0.295 | 17 | 2.509 | 29 | -- | -- |
| 31.62 | 0.264 | 11.5 | 0.401 | 0.822 | 0.412 | -- | -- | 0.301 | 16.9 | 3.76 | 23 | -- | -- |
| 65.74 | 0.38 | 11.4 | 0.373 | -- | 0.301 | -- | 0.261 | 0.27 | -- | 2.509 | 29 | -- | -- |
| 35.09 | 0.278 | 11.5 | 0.389 | 0.88 | -- | 0.136 | -- | 0.279 | 19.1 | -- | -- | -- | -- |
| 35.14 | 0.278 | 11.5 | 0.387 | 0.881 | -- | -- | -- | 0.279 | 19.1 | -- | -- | -- | -- |
| 66.02 | 0.38 | 11.4 | 0.37 | -- | 0.306 | -- | -- | 0.276 | -- | 3.76 | 23 | -- | -- |
| 35.69 | 0.28 | 11.5 | -- | 0.816 | 0.41 | -- | -- | 0.26 | 16.9 | 4.569 | 23 | -- | -- |
| 76 | 0.407 | 11.4 | 0.37 | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
| 39.08 | 0.292 | 11.5 | -- | 0.876 | -- | -- | -- | 0.236 | 19.1 | -- | -- | -- | -- |
| 69.62 | 0.39 | 11.5 | -- | -- | 0.307 | -- | -- | 0.237 | -- | 4.569 | 23 | -- | -- |
| 79.61 | 0.416 | 11.5 | -- | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.75 | radiation | 20.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 4 | 27.26 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 7 |
| 13 | 27.64 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 28 | 27.83 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 32 | 27.93 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 77 | 28.22 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 94 | 28.31 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 105 | 28.34 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 107 | 28.40 | humidity | 60.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 108 | 28.41 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 109 | 28.41 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 110 | 28.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 113 | 28.43 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 116 | 28.46 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 118 | 28.47 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 4 |
| 119 | 28.47 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 123 | 28.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 125 | 28.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 127 | 28.50 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 129 | 28.51 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 130 | 28.51 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 133 | 28.51 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 134 | 28.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 135 | 28.51 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 140 | 28.57 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 145 | 28.60 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 151 | 28.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 168 | 28.66 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 178 | 28.70 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 198 | 28.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 220 | 28.76 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 222 | 28.76 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 228 | 28.78 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 250 | 28.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 256 | 28.85 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 257 | 28.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 270 | 28.91 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 273 | 28.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 280 | 28.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 20 |
| 281 | 28.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 289 | 28.98 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 309 | 28.99 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 317 | 29.02 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 348 | 29.06 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 375 | 29.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 378 | 29.10 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 379 | 29.10 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 380 | 29.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 399 | 29.13 | radiation | 1.0 | 30 | > th | dose dependent | sin | 12 | NA |
| 431 | 29.18 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 10 |
| 432 | 29.18 | wind | 9.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 440 | 29.22 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 456 | 29.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 459 | 29.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 460 | 29.25 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 462 | 29.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 486 | 29.30 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 514 | 29.32 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 526 | 29.35 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 536 | 29.36 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 540 | 29.37 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 20 |
| 572 | 29.42 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 583 | 29.45 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 597 | 29.46 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 618 | 29.48 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 627 | 29.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 628 | 29.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 654 | 29.55 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 655 | 29.55 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 14 |
| 684 | 29.58 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 686 | 29.58 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 20 |
| 694 | 29.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 695 | 29.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 718 | 29.65 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 19 |
| 719 | 29.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 20 |
| 723 | 29.65 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 751 | 29.69 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 756 | 29.70 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 794 | 29.73 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 798 | 29.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 5 |
| 808 | 29.76 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 813 | 29.77 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 827 | 29.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 834 | 29.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 838 | 29.80 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 861 | 29.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 864 | 29.84 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 865 | 29.84 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 866 | 29.84 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 5 |
| 867 | 29.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 868 | 29.84 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 872 | 29.84 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 5 |
| 891 | 29.87 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 896 | 29.88 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 897 | 29.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 901 | 29.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 902 | 29.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 14 |
| 903 | 29.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 926 | 29.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 10 |
| 933 | 29.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 10 |
| 936 | 29.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 10 |
| 964 | 29.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 997 | 29.95 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 5 |