Os06g0468300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os06g0468300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 358.06 | 0.889 | 3.95 | -0.533 | 0.0367 | 0.684 | -1.43 | -3.93 | -0.557 | 5.99 | 20.68 | 651 | -- | -- |
| 371.12 | 0.897 | 3.91 | -0.242 | 0.0185 | 0.638 | 0.658 | -- | -0.5 | 19.5 | 49.36 | 636 | -- | -- |
| 360.75 | 0.885 | 3.94 | -0.449 | 0.0814 | 0.74 | -- | -2.62 | -0.534 | 5.19 | 20.67 | 627 | -- | -- |
| 368.76 | 0.894 | 3.92 | -0.212 | 0.0321 | 0.574 | -- | -- | -0.44 | 19.3 | 49.37 | 661 | -- | -- |
| 360.99 | 0.885 | 3.94 | -0.479 | -- | 0.673 | -- | -2.77 | -0.534 | -- | 20.67 | 627 | -- | -- |
| 374.75 | 0.908 | 3.9 | -0.235 | 0.338 | -- | -0.14 | -- | -0.369 | 18.3 | -- | -- | -- | -- |
| 374.79 | 0.907 | 3.9 | -0.234 | 0.338 | -- | -- | -- | -0.37 | 18.4 | -- | -- | -- | -- |
| 368.9 | 0.895 | 3.92 | -0.216 | -- | 0.588 | -- | -- | -0.432 | -- | 49.37 | 661 | -- | -- |
| 369.84 | 0.896 | 3.91 | -- | 0.0506 | 0.582 | -- | -- | -0.42 | 19.1 | 49.37 | 669 | -- | -- |
| 380.72 | 0.912 | 3.89 | -0.242 | -- | -- | -- | -- | -0.377 | -- | -- | -- | -- | -- |
| 376.23 | 0.907 | 3.89 | -- | 0.341 | -- | -- | -- | -0.344 | 18.4 | -- | -- | -- | -- |
| 369.93 | 0.896 | 3.9 | -- | -- | 0.581 | -- | -- | -0.4 | -- | 49.37 | 670 | -- | -- |
| 382.27 | 0.913 | 3.89 | -- | -- | -- | -- | -- | -0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.21 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 2 | 355.24 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 6 | 355.24 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 11 | 355.56 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 19 | 358.94 | radiation | 20.0 | 720 | > th | dose independent | rect. | 6 | 9 |
| 50 | 359.37 | radiation | 20.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 51 | 359.39 | radiation | 20.0 | 720 | > th | dose independent | sin | 2 | NA |
| 55 | 359.43 | radiation | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 169 | 359.82 | radiation | 20.0 | 720 | > th | dose independent | rect. | 10 | 23 |
| 377 | 360.43 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 384 | 360.81 | wind | 3.0 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 387 | 360.83 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 13 |
| 391 | 360.86 | wind | 3.0 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 395 | 360.89 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 9 | 7 |
| 403 | 361.07 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 421 | 361.13 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 422 | 361.13 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 424 | 361.13 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 428 | 361.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 11 |
| 430 | 361.18 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 480 | 361.39 | radiation | 40.0 | 720 | < th | dose independent | rect. | 4 | 18 |
| 484 | 361.45 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 7 | 9 |
| 500 | 361.51 | radiation | 10.0 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 519 | 361.56 | radiation | 30.0 | 720 | > th | dose independent | sin | 12 | NA |
| 521 | 361.59 | radiation | 40.0 | 720 | < th | dose independent | rect. | 9 | 7 |
| 556 | 361.67 | radiation | 10.0 | 720 | > th | dose dependent | no | NA | NA |
| 557 | 361.67 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 559 | 361.67 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 641 | 361.71 | radiation | 40.0 | 720 | < th | dose independent | rect. | 9 | 14 |
| 642 | 361.72 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 21 |
| 648 | 361.74 | radiation | 10.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 662 | 361.78 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 19 | 21 |
| 689 | 361.87 | radiation | 40.0 | 720 | < th | dose independent | rect. | 2 | 21 |
| 725 | 361.91 | radiation | 40.0 | 720 | < th | dose independent | rect. | 9 | 22 |
| 747 | 361.98 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 869 | 362.08 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 870 | 362.09 | radiation | 40.0 | 720 | < th | dose independent | rect. | 4 | 23 |
| 873 | 362.11 | radiation | 40.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 876 | 362.12 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 24 | 5 |
| 877 | 362.12 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 19 |
| 887 | 362.15 | radiation | 40.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 919 | 362.18 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 941 | 362.23 | radiation | 40.0 | 720 | < th | dose independent | rect. | 1 | 15 |
| 949 | 362.25 | radiation | 40.0 | 720 | < th | dose independent | no | NA | NA |
| 957 | 362.29 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 23 |