Os06g0367900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitogen-activated protein kinase homologue.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0367900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Mitogen-activated protein kinase homologue.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35 | 0.278 | 10.4 | -0.402 | 1.38 | -0.651 | 0.258 | 0.811 | -0.124 | 15.2 | 9.799 | 128 | -- | -- |
| 36.23 | 0.28 | 10.4 | -0.407 | 1.38 | -0.635 | -0.559 | -- | -0.119 | 15 | 10 | 141 | -- | -- |
| 34.96 | 0.275 | 10.4 | -0.408 | 1.38 | -0.643 | -- | 0.648 | -0.126 | 15.1 | 10 | 139 | -- | -- |
| 37.26 | 0.284 | 10.4 | -0.419 | 1.35 | -0.649 | -- | -- | -0.125 | 15 | 10 | 160 | -- | -- |
| 56.05 | 0.349 | 10.4 | -0.251 | -- | -1.59 | -- | 1.72 | -0.0839 | -- | 5.963 | 276 | -- | -- |
| 40.8 | 0.299 | 10.4 | -0.391 | 2.02 | -- | -0.639 | -- | -0.0968 | 14.4 | -- | -- | -- | -- |
| 42.28 | 0.305 | 10.4 | -0.409 | 2.02 | -- | -- | -- | -0.1 | 14.4 | -- | -- | -- | -- |
| 49.65 | 0.328 | 10.4 | -0.524 | -- | -1.66 | -- | -- | -0.167 | -- | 3.083 | 293 | -- | -- |
| 41.81 | 0.301 | 10.4 | -- | 1.39 | -0.617 | -- | -- | -0.0826 | 15 | 10 | 160 | -- | -- |
| 283.54 | 0.787 | 10.4 | -0.494 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 46.68 | 0.32 | 10.4 | -- | 2.03 | -- | -- | -- | -0.0549 | 14.4 | -- | -- | -- | -- |
| 56.06 | 0.349 | 10.4 | -- | -- | -1.68 | -- | -- | -0.112 | -- | 6.24 | 280 | -- | -- |
| 289.98 | 0.795 | 10.4 | -- | -- | -- | -- | -- | -0.0954 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 2 | 25.67 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 4 | 25.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 5 | 25.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 7 | 25.76 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 11 | 25.89 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 14 | 25.91 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 18 | 25.98 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 21 | 25.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 23 | 25.99 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 24 | 25.99 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 26 | 25.99 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 27 | 25.99 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 29 | 25.99 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 30 | 26.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 32 | 26.02 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 33 | 26.02 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 47 | 26.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 53 | 26.09 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 54 | 26.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 91 | 26.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 93 | 26.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 116 | 26.72 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 118 | 26.75 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 138 | 26.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 139 | 26.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 144 | 26.99 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 198 | 27.29 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 205 | 27.34 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 228 | 27.51 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 271 | 27.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 14 |
| 273 | 27.70 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 275 | 27.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 302 | 27.73 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 307 | 27.75 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 3 |
| 311 | 27.75 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 315 | 27.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 317 | 27.76 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 318 | 27.76 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 321 | 27.76 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 322 | 27.76 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 326 | 27.76 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 332 | 27.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 334 | 27.79 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 344 | 27.84 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 347 | 27.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 10 |
| 350 | 27.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 10 |
| 351 | 27.88 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 358 | 27.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 359 | 27.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 360 | 27.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 364 | 27.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 369 | 27.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 372 | 27.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 373 | 27.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 374 | 27.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 388 | 27.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 398 | 28.01 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 443 | 28.11 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 457 | 28.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 515 | 28.23 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 518 | 28.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 527 | 28.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 11 |
| 531 | 28.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 11 |
| 535 | 28.29 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 537 | 28.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 571 | 28.38 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 606 | 28.48 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 646 | 28.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 652 | 28.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 654 | 28.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 662 | 28.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 21 |
| 667 | 28.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 710 | 28.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 716 | 28.70 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 750 | 28.76 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 773 | 28.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 784 | 28.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 785 | 28.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 827 | 28.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 839 | 28.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 842 | 28.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 20 |
| 843 | 28.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 845 | 28.92 | wind | 7.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 898 | 28.96 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 914 | 29.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 916 | 29.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 917 | 29.00 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 920 | 29.00 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 921 | 29.00 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 927 | 29.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 929 | 29.00 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 934 | 29.00 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 952 | 29.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 976 | 29.05 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 993 | 29.09 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 6 |