Os06g0367100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 13, N-terminal domain containing protein.
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Os06g0367100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 13, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.17 | 0.593 | 10.5 | 2.11 | 3.66 | 2.7 | 0.284 | -0.807 | 0.0464 | 20.4 | 20.1 | 245 | 22.9 | -- |
| 160.02 | 0.589 | 10.5 | 2.05 | 3.66 | 2.8 | 0.484 | -- | 0.0354 | 20.4 | 20.11 | 243 | 22.8 | -- |
| 159.3 | 0.588 | 10.5 | 2.11 | 3.66 | 2.71 | -- | -0.937 | 0.0456 | 20.4 | 20.1 | 235 | 22.8 | -- |
| 160.65 | 0.59 | 10.5 | 2.04 | 3.66 | 2.89 | -- | -- | 0.0277 | 20.4 | 20.17 | 235 | 22.5 | -- |
| 824.06 | 1.34 | 10.5 | 1.76 | -- | 1.38 | -- | -0.897 | -0.0652 | -- | 20.3 | 33 | 2.62 | -- |
| 260.68 | 0.757 | 10.6 | 1.64 | 3.32 | -- | 0.953 | -- | -0.239 | 20.6 | -- | -- | -- | -- |
| 263.6 | 0.76 | 10.6 | 1.61 | 3.32 | -- | -- | -- | -0.238 | 20.5 | -- | -- | -- | -- |
| 789.36 | 1.31 | 10.4 | 1.82 | -- | 1.43 | -- | -- | 0.0235 | -- | 22.4 | 3 | 6.73 | -- |
| 264.98 | 0.758 | 10.6 | -- | 3.57 | 2.27 | -- | -- | -0.147 | 20.4 | 20.3 | 231 | 23.1 | -- |
| 882.02 | 1.39 | 10.5 | 1.6 | -- | -- | -- | -- | -0.269 | -- | -- | -- | -- | -- |
| 332.33 | 0.853 | 10.6 | -- | 3.31 | -- | -- | -- | -0.418 | 20.6 | -- | -- | -- | -- |
| 332.33 | 0.849 | 10.5 | -- | -- | 3.29 | -- | -- | -0.418 | -- | 66.61 | 6 | 9.47 | -- |
| 949.73 | 1.44 | 10.5 | -- | -- | -- | -- | -- | -0.447 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.46 | temperature | 20 | 270 | < th | dose independent | sin | 5 | NA |
| 2 | 161.59 | temperature | 20 | 270 | > th | dose independent | sin | 6 | NA |
| 7 | 164.69 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 13 |
| 9 | 164.94 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 11 |
| 14 | 165.50 | temperature | 25 | 90 | < th | dose dependent | sin | 5 | NA |
| 38 | 168.57 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 9 |
| 64 | 172.50 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 65 | 172.53 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 78 | 174.16 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 16 |
| 91 | 175.30 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 125 | 178.01 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 126 | 178.16 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 19 |
| 158 | 179.55 | temperature | 15 | 90 | > th | dose dependent | sin | 6 | NA |
| 252 | 183.75 | temperature | 20 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 294 | 184.90 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 22 |
| 436 | 188.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 657 | 194.40 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 661 | 194.45 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 725 | 195.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 899 | 199.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 6 |