Os06g0361500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0361500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.91 | 0.381 | 6.16 | 1 | 0.464 | -1 | -0.302 | -2.81 | 0.422 | 10.9 | 19.9 | 6071 | -- | -- |
| 73.16 | 0.398 | 6.28 | 0.787 | 0.472 | -0.401 | -0.323 | -- | 0.343 | 11 | 24.7 | 3299 | -- | -- |
| 66.24 | 0.379 | 6.16 | 0.982 | 0.468 | -1.01 | -- | -2.84 | 0.421 | 10.9 | 19.95 | 6191 | -- | -- |
| 73.56 | 0.399 | 6.28 | 0.775 | 0.479 | -0.397 | -- | -- | 0.344 | 10.8 | 24.78 | 3318 | -- | -- |
| 79.7 | 0.416 | 6.18 | 0.972 | -- | -0.971 | -- | -2.71 | 0.417 | -- | 20 | 5996 | -- | -- |
| 76.93 | 0.411 | 6.25 | 0.932 | 0.453 | -- | -0.314 | -- | 0.45 | 10.8 | -- | -- | -- | -- |
| 77.34 | 0.412 | 6.25 | 0.919 | 0.454 | -- | -- | -- | 0.45 | 10.9 | -- | -- | -- | -- |
| 84.93 | 0.431 | 6.29 | 0.845 | -- | -0.237 | -- | -- | 0.328 | -- | 24.78 | 3318 | -- | -- |
| 81.14 | 0.42 | 6.33 | -- | 0.488 | -0.721 | -- | -- | 0.146 | 10.4 | 20.1 | 14490 | -- | -- |
| 90.16 | 0.444 | 6.27 | 0.909 | -- | -- | -- | -- | 0.447 | -- | -- | -- | -- | -- |
| 99.61 | 0.467 | 6.28 | -- | 0.447 | -- | -- | -- | 0.347 | 10.7 | -- | -- | -- | -- |
| 88.77 | 0.439 | 6.34 | -- | -- | -0.706 | -- | -- | 0.0993 | -- | 22.05 | 47520 | -- | -- |
| 111.98 | 0.494 | 6.29 | -- | -- | -- | -- | -- | 0.346 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.39 | wind | 7 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 2 | 64.45 | wind | 5 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 3 | 64.49 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 7 | 64.58 | wind | 5 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 10 | 64.61 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 27 | 65.13 | wind | 7 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 45 | 65.53 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 51 | 65.59 | wind | 5 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 56 | 65.63 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 58 | 65.65 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 15 |
| 68 | 65.69 | wind | 7 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 88 | 65.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 103 | 65.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 160 | 66.43 | wind | 3 | 4320 | > th | dose dependent | rect. | 19 | 16 |
| 162 | 66.45 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 186 | 66.67 | temperature | 15 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 212 | 66.75 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 240 | 66.85 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 252 | 66.89 | wind | 5 | 4320 | > th | dose independent | sin | 9 | NA |
| 259 | 66.90 | wind | 5 | 4320 | < th | dose independent | sin | 9 | NA |
| 268 | 66.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 286 | 66.97 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 307 | 67.00 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 355 | 67.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 380 | 67.12 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 463 | 67.24 | temperature | 20 | 4320 | < th | dose independent | sin | 12 | NA |
| 469 | 67.25 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 533 | 67.33 | temperature | 20 | 4320 | > th | dose independent | sin | 12 | NA |
| 576 | 67.38 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 683 | 67.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 741 | 67.56 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 758 | 67.59 | wind | 5 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 794 | 67.62 | wind | 5 | 1440 | > th | dose dependent | sin | 8 | NA |
| 807 | 67.63 | wind | 3 | 4320 | > th | dose dependent | sin | 10 | NA |
| 812 | 67.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 890 | 67.71 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 897 | 67.71 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 945 | 67.76 | wind | 5 | 4320 | < th | dose independent | rect. | 9 | 2 |