Os06g0360600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0360600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.56 | 0.375 | 6.64 | -1.45 | 0.622 | -2.05 | 0.49 | -0.876 | -0.0415 | 4.5 | 25.94 | 224 | -- | -- |
| 64.33 | 0.374 | 6.66 | -1.6 | 0.69 | -1.99 | 0.273 | -- | -0.0731 | 4.5 | 26.77 | 228 | -- | -- |
| 64.09 | 0.373 | 6.65 | -1.5 | 0.626 | -2.03 | -- | -0.589 | -0.0522 | 4.43 | 25.97 | 224 | -- | -- |
| 64.48 | 0.374 | 6.66 | -1.61 | 0.685 | -2 | -- | -- | -0.086 | 4.45 | 26.63 | 220 | -- | -- |
| 75.73 | 0.405 | 6.64 | -1.46 | -- | -1.88 | -- | -0.519 | 0.0413 | -- | 24.3 | 259 | -- | -- |
| 121.9 | 0.518 | 6.56 | -1.09 | 0.229 | -- | 0.345 | -- | 0.358 | 5.91 | -- | -- | -- | -- |
| 122.17 | 0.518 | 6.56 | -1.09 | 0.232 | -- | -- | -- | 0.356 | 5.59 | -- | -- | -- | -- |
| 76.53 | 0.407 | 6.64 | -1.53 | -- | -1.82 | -- | -- | 0.0431 | -- | 24.3 | 274 | -- | -- |
| 125.05 | 0.521 | 6.59 | -- | 0.468 | -1.38 | -- | -- | 0.226 | 3.93 | 26.05 | 167 | -- | -- |
| 124.96 | 0.522 | 6.57 | -1.08 | -- | -- | -- | -- | 0.362 | -- | -- | -- | -- | -- |
| 153.4 | 0.579 | 6.54 | -- | 0.214 | -- | -- | -- | 0.478 | 5.81 | -- | -- | -- | -- |
| 132 | 0.535 | 6.58 | -- | -- | -1.2 | -- | -- | 0.309 | -- | 24.3 | 191 | -- | -- |
| 155.79 | 0.583 | 6.54 | -- | -- | -- | -- | -- | 0.482 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.38 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 63.59 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 7 | 64.11 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 8 | 64.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 19 | 64.98 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 80 | 68.01 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 129 | 68.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 354 | 72.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 18 | NA |
| 426 | 73.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 10 |
| 468 | 73.48 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 485 | 73.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 486 | 73.56 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 508 | 73.68 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 516 | 73.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 579 | 73.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 681 | 74.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 746 | 74.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 1 |