Os06g0360500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0360500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.59 | 0.507 | 7.7 | 0.336 | 0.212 | 4.08 | -0.235 | 4.77 | -0.431 | 22.5 | 18.92 | 4833 | -- | -- |
| 119.48 | 0.509 | 7.59 | 0.415 | 0.197 | 2.07 | -0.248 | -- | -0.36 | 21.6 | 20.39 | 5557 | -- | -- |
| 116.7 | 0.503 | 7.71 | 0.355 | 0.205 | 4.38 | -- | 5.41 | -0.444 | 22.9 | 18.65 | 4934 | -- | -- |
| 119.37 | 0.509 | 7.58 | 0.408 | 0.212 | 2.05 | -- | -- | -0.369 | 23.1 | 20.47 | 5556 | -- | -- |
| 118.85 | 0.508 | 7.71 | 0.464 | -- | 4.74 | -- | 5.84 | -0.41 | -- | 18.89 | 5734 | -- | -- |
| 155.31 | 0.584 | 7.66 | -0.534 | 0.193 | -- | -0.276 | -- | -0.701 | 21.9 | -- | -- | -- | -- |
| 155.57 | 0.584 | 7.66 | -0.525 | 0.194 | -- | -- | -- | -0.701 | 22.4 | -- | -- | -- | -- |
| 121.91 | 0.514 | 7.58 | 0.424 | -- | 2.06 | -- | -- | -0.367 | -- | 20.43 | 5740 | -- | -- |
| 122.04 | 0.515 | 7.6 | -- | 0.209 | 1.74 | -- | -- | -0.462 | 23.1 | 20.11 | 5530 | -- | -- |
| 157.88 | 0.587 | 7.65 | -0.521 | -- | -- | -- | -- | -0.701 | -- | -- | -- | -- | -- |
| 162.82 | 0.597 | 7.65 | -- | 0.191 | -- | -- | -- | -0.643 | 22.2 | -- | -- | -- | -- |
| 124.66 | 0.52 | 7.6 | -- | -- | 1.74 | -- | -- | -0.463 | -- | 20.1 | 5672 | -- | -- |
| 165.04 | 0.6 | 7.64 | -- | -- | -- | -- | -- | -0.643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.00 | humidity | 50 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 5 | 107.35 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 6 | 107.37 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 9 |
| 34 | 107.81 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 91 | 108.26 | humidity | 90 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 124 | 108.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 138 | 108.58 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 10 |
| 169 | 108.79 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 200 | 109.00 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 218 | 109.11 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 13 |
| 223 | 109.12 | humidity | 80 | 43200 | < th | dose dependent | sin | 12 | NA |
| 226 | 109.16 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 275 | 109.45 | humidity | 70 | 43200 | > th | dose independent | sin | 11 | NA |
| 291 | 109.58 | humidity | 90 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 306 | 109.69 | humidity | 50 | 43200 | > th | dose dependent | sin | 10 | NA |
| 311 | 109.72 | humidity | 70 | 43200 | < th | dose independent | sin | 11 | NA |
| 312 | 109.72 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 325 | 109.80 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 333 | 109.83 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 408 | 110.27 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 606 | 111.44 | wind | 3 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 614 | 111.48 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 617 | 111.50 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 621 | 111.52 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 625 | 111.55 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 679 | 111.77 | humidity | 90 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 686 | 111.79 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 705 | 111.85 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 706 | 111.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 712 | 111.88 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 733 | 111.99 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 735 | 111.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 757 | 112.04 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 810 | 112.20 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 811 | 112.20 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 825 | 112.24 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 830 | 112.25 | wind | 3 | 14400 | > th | dose independent | rect. | 21 | 21 |
| 843 | 112.29 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 16 |
| 861 | 112.32 | wind | 1 | 14400 | > th | dose dependent | rect. | 14 | 18 |
| 901 | 112.42 | wind | 9 | 14400 | < th | dose dependent | rect. | 14 | 18 |
| 908 | 112.44 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 909 | 112.44 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 916 | 112.45 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 15 |
| 961 | 112.52 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 992 | 112.57 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 998 | 112.58 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 7 |