Os06g0359400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0359400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.02 | 0.225 | 9.49 | 0.388 | 0.193 | -0.49 | 0.21 | 0.0826 | 0.163 | 15.3 | 25.93 | 62 | -- | -- |
| 23.02 | 0.223 | 9.49 | 0.38 | 0.191 | -0.483 | 0.217 | -- | 0.16 | 15.2 | 25.99 | 61 | -- | -- |
| 23.13 | 0.224 | 9.49 | 0.41 | 0.192 | -0.504 | -- | 0.341 | 0.166 | 15.4 | 26.03 | 57 | -- | -- |
| 23.16 | 0.224 | 9.49 | 0.381 | 0.187 | -0.479 | -- | -- | 0.158 | 15.5 | 26.11 | 52 | -- | -- |
| 24.31 | 0.231 | 9.49 | 0.36 | -- | -0.356 | -- | 0.121 | 0.148 | -- | 26.82 | 49 | -- | -- |
| 26.34 | 0.241 | 9.49 | 0.301 | 0.00756 | -- | -0.288 | -- | 0.143 | 20.8 | -- | -- | -- | -- |
| 26.6 | 0.242 | 9.49 | 0.312 | 0.0203 | -- | -- | -- | 0.143 | 16.8 | -- | -- | -- | -- |
| 24.32 | 0.231 | 9.49 | 0.35 | -- | -0.347 | -- | -- | 0.146 | -- | 26.82 | 49 | -- | -- |
| 26.79 | 0.242 | 9.5 | -- | 0.134 | -0.399 | -- | -- | 0.112 | 15.1 | 26.58 | 41 | -- | -- |
| 26.62 | 0.241 | 9.49 | 0.311 | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
| 29.16 | 0.253 | 9.5 | -- | 0.0148 | -- | -- | -- | 0.109 | 17.4 | -- | -- | -- | -- |
| 27.5 | 0.245 | 9.5 | -- | -- | -0.296 | -- | -- | 0.107 | -- | 26.9 | 29 | -- | -- |
| 29.17 | 0.252 | 9.5 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.69 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 4 | 21.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 6 | 22.11 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 19 | 14 |
| 7 | 22.12 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 8 | 22.14 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 13 |
| 10 | 22.17 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 17 | 22.28 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 24 | 22.35 | radiation | 10.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 29 | 22.40 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 7 | 4 |
| 52 | 22.52 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 54 | 22.53 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 60 | 22.55 | radiation | 10.0 | 720 | < th | dose independent | rect. | 5 | 2 |
| 69 | 22.58 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 95 | 22.70 | radiation | 20.0 | 720 | < th | dose independent | rect. | 19 | 14 |
| 100 | 22.72 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 14 |
| 103 | 22.73 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 106 | 22.74 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 117 | 22.76 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 15 |
| 128 | 22.78 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 130 | 22.78 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 139 | 22.80 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 146 | 22.82 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 171 | 22.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 189 | 22.89 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 197 | 22.90 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 206 | 22.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 20 |
| 210 | 22.91 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 212 | 22.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 215 | 22.92 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 224 | 22.93 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 228 | 22.93 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 229 | 22.93 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 244 | 22.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 252 | 22.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 257 | 22.95 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 258 | 22.95 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 271 | 22.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 17 |
| 280 | 22.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 287 | 22.97 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 289 | 22.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 290 | 22.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 304 | 22.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 22 |
| 305 | 22.98 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 306 | 22.98 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 310 | 22.98 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 316 | 22.98 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 324 | 22.99 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 335 | 22.99 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 345 | 23.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 370 | 23.01 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 381 | 23.01 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 382 | 23.01 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 14 |
| 399 | 23.02 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 15 |
| 400 | 23.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 17 |
| 402 | 23.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 17 |
| 425 | 23.02 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 11 |
| 428 | 23.02 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 437 | 23.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 17 |
| 442 | 23.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 496 | 23.04 | humidity | 90.0 | 720 | < th | dose independent | rect. | 7 | 4 |
| 506 | 23.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 507 | 23.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 552 | 23.04 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 584 | 23.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 593 | 23.05 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 645 | 23.06 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 646 | 23.06 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 653 | 23.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 657 | 23.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 658 | 23.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 22 |
| 718 | 23.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 739 | 23.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 22 |
| 743 | 23.07 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 745 | 23.07 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 747 | 23.07 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 10 |
| 751 | 23.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 755 | 23.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 18 |
| 756 | 23.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 757 | 23.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 765 | 23.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 767 | 23.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 770 | 23.07 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 799 | 23.07 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 832 | 23.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 838 | 23.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 839 | 23.08 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 859 | 23.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 880 | 23.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 886 | 23.08 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 971 | 23.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 17 |
| 989 | 23.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 992 | 23.09 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 993 | 23.09 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |