Os06g0356800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Xylanase inhibitor protein I precursor.
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Os06g0356800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Xylanase inhibitor protein I precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 249.09 | 0.742 | 8.62 | -0.354 | 0.0501 | -1.93 | -1.76 | 1.35 | 0.632 | 18.3 | 24.44 | 4211 | -- | -- |
| 249.71 | 0.736 | 8.65 | -0.673 | 0.0298 | -1.79 | -1.81 | -- | 0.626 | 18.2 | 23.62 | 4198 | -- | -- |
| 255.51 | 0.744 | 8.59 | -0.135 | 0.143 | -1.98 | -- | 2.09 | 0.662 | 13.7 | 24.6 | 4302 | -- | -- |
| 255.94 | 0.745 | 8.66 | -0.669 | 0.185 | -1.73 | -- | -- | 0.55 | 13.1 | 24.31 | 4365 | -- | -- |
| 256.89 | 0.746 | 8.6 | -0.169 | -- | -2 | -- | 1.97 | 0.667 | -- | 24.5 | 4237 | -- | -- |
| 346.76 | 0.873 | 8.69 | -1.3 | 0.127 | -- | -1.63 | -- | 0.431 | 17.9 | -- | -- | -- | -- |
| 348.44 | 0.874 | 8.69 | -1.28 | 0.302 | -- | -- | -- | 0.429 | 13.5 | -- | -- | -- | -- |
| 257.4 | 0.747 | 8.65 | -0.639 | -- | -1.79 | -- | -- | 0.612 | -- | 23.64 | 4211 | -- | -- |
| 261.4 | 0.753 | 8.57 | -- | 0.143 | -1.97 | -- | -- | 1.02 | 12 | 18.59 | 6856 | -- | -- |
| 354.03 | 0.879 | 8.69 | -1.29 | -- | -- | -- | -- | 0.422 | -- | -- | -- | -- | -- |
| 391.47 | 0.926 | 8.66 | -- | 0.325 | -- | -- | -- | 0.571 | 13.6 | -- | -- | -- | -- |
| 262.74 | 0.755 | 8.56 | -- | -- | -2 | -- | -- | 1.04 | -- | 18.2 | 6817 | -- | -- |
| 397.9 | 0.931 | 8.66 | -- | -- | -- | -- | -- | 0.565 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.35 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 2 | 240.45 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 15 |
| 5 | 240.69 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 11 | 241.06 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 30 | 242.45 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 35 | 243.03 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 36 | 243.04 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 43 | 243.19 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 55 | 243.66 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 73 | 244.39 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 7 |
| 85 | 244.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 87 | 244.76 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 93 | 244.89 | temperature | 25.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 96 | 244.97 | temperature | 25.0 | 4320 | > th | dose independent | sin | 9 | NA |
| 101 | 245.12 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 125 | 245.51 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 153 | 245.95 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 169 | 246.14 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 213 | 246.85 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 222 | 246.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 16 |
| 237 | 247.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 311 | 248.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 338 | 248.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 19 |
| 355 | 248.72 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 384 | 248.96 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 9 | NA |
| 394 | 249.10 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 418 | 249.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 420 | 249.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 422 | 249.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 455 | 249.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 481 | 249.78 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 482 | 249.78 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 486 | 249.80 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 489 | 249.81 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 506 | 249.88 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 513 | 249.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 514 | 249.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 534 | 250.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 561 | 250.10 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 575 | 250.16 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 582 | 250.19 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 605 | 250.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 621 | 250.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 627 | 250.40 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 643 | 250.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 648 | 250.52 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 657 | 250.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 658 | 250.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 660 | 250.57 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 664 | 250.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 666 | 250.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 697 | 250.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 698 | 250.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 716 | 250.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 732 | 250.86 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 8 | NA |
| 734 | 250.86 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 8 | NA |
| 744 | 250.90 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 757 | 250.94 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 8 | NA |
| 770 | 250.99 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 789 | 251.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 792 | 251.10 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 807 | 251.18 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 808 | 251.19 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 821 | 251.23 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 843 | 251.31 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 845 | 251.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 850 | 251.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 862 | 251.37 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 921 | 251.51 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 2 | 14 |
| 927 | 251.52 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 928 | 251.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 932 | 251.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 937 | 251.53 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 942 | 251.54 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 12 |
| 949 | 251.56 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 1 |