Os06g0356700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Xylanase inhibitor protein I precursor.
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Os06g0356700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Xylanase inhibitor protein I precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315.98 | 0.835 | 4.49 | 0.23 | 0.234 | -0.962 | 2.35 | -2.77 | -0.686 | 17.6 | 21.73 | 1941 | -- | -- |
| 331.57 | 0.848 | 4.38 | 0.93 | 0.288 | -0.747 | 2.09 | -- | -0.419 | 17.7 | 23.72 | 1623 | -- | -- |
| 327.14 | 0.842 | 4.46 | 0.143 | 0.19 | -0.827 | -- | -2.63 | -0.696 | 17 | 22 | 1478 | -- | -- |
| 340.75 | 0.86 | 4.37 | 0.973 | 0.225 | -0.76 | -- | -- | -0.411 | 17.6 | 23.72 | 1691 | -- | -- |
| 328.86 | 0.845 | 4.46 | 0.108 | -- | -0.829 | -- | -2.65 | -0.687 | -- | 22 | 1457 | -- | -- |
| 355.34 | 0.884 | 4.44 | 0.655 | 0.206 | -- | 2.05 | -- | -0.754 | 17.3 | -- | -- | -- | -- |
| 365.86 | 0.896 | 4.44 | 0.653 | 0.219 | -- | -- | -- | -0.745 | 17.2 | -- | -- | -- | -- |
| 343.01 | 0.863 | 4.36 | 0.966 | -- | -0.764 | -- | -- | -0.409 | -- | 23.74 | 1589 | -- | -- |
| 363.37 | 0.888 | 4.39 | -- | 0.182 | -0.532 | -- | -- | -0.58 | 17.4 | 23.72 | 1582 | -- | -- |
| 368.36 | 0.897 | 4.44 | 0.645 | -- | -- | -- | -- | -0.75 | -- | -- | -- | -- | -- |
| 377.09 | 0.908 | 4.46 | -- | 0.207 | -- | -- | -- | -0.818 | 17.3 | -- | -- | -- | -- |
| 364.96 | 0.89 | 4.4 | -- | -- | -0.543 | -- | -- | -0.601 | -- | 23.72 | 1432 | -- | -- |
| 379.34 | 0.909 | 4.45 | -- | -- | -- | -- | -- | -0.822 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 314.80 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 2 | 316.31 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 3 | 317.44 | wind | 3 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 4 | 318.00 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 6 | 318.33 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 7 | 318.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 18 |
| 10 | 318.62 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 25 | 319.81 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 35 | 320.04 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 37 | 320.09 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 39 | 320.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 47 | 320.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 65 | 320.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 97 | 321.21 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 155 | 321.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 156 | 321.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 190 | 322.41 | humidity | 80 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 198 | 322.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 211 | 322.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 212 | 322.59 | humidity | 70 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 218 | 322.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 230 | 322.68 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 236 | 322.71 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 237 | 322.71 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 240 | 322.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 283 | 322.93 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 315 | 323.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 326 | 323.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 8 |
| 405 | 323.58 | humidity | 80 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 449 | 323.85 | humidity | 80 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 470 | 323.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 471 | 323.97 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 477 | 323.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 478 | 323.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 20 |
| 507 | 324.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 558 | 324.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 575 | 324.44 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 638 | 324.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 20 |
| 641 | 324.78 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 648 | 324.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 663 | 324.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 664 | 324.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 709 | 324.97 | wind | 9 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 797 | 325.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 821 | 325.29 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 835 | 325.34 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 851 | 325.40 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 892 | 325.53 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 962 | 325.79 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |