Os06g0355800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0355800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.68 | 0.607 | 5.81 | -0.981 | 0.387 | -2.78 | -1.13 | -3.44 | -0.24 | 11.1 | 25.52 | 73 | 0.0228 | 23.1 |
| 179.32 | 0.624 | 5.82 | -1.23 | 0.356 | -2.35 | -1.41 | -- | -0.141 | 9.92 | 30.83 | 70 | 0.05 | 23.4 |
| 171.34 | 0.61 | 5.81 | -1.02 | 0.421 | -2.66 | -- | -3.18 | -0.208 | 12.2 | 25.33 | 70 | 0.0174 | 23.1 |
| 181.44 | 0.627 | 5.86 | -1.47 | 0.262 | -2.35 | -- | -- | -0.315 | 10.5 | 29.27 | 54 | 0.246 | 23.4 |
| 178.6 | 0.622 | 5.82 | -0.979 | -- | -2.49 | -- | -3.01 | -0.193 | -- | 27.43 | 37 | 0.0499 | 23.6 |
| 261.11 | 0.758 | 5.77 | -0.94 | 0.709 | -- | 0.11 | -- | 0.111 | 13.9 | -- | -- | -- | -- |
| 261.15 | 0.757 | 5.77 | -0.937 | 0.708 | -- | -- | -- | 0.111 | 13.9 | -- | -- | -- | -- |
| 185.8 | 0.635 | 5.86 | -1.47 | -- | -2.35 | -- | -- | -0.316 | -- | 29.3 | 51 | 0.3 | 23.4 |
| 235.87 | 0.715 | 5.81 | -- | 0.292 | -2.17 | -- | -- | -0.0531 | 11.1 | 37.56 | 25 | 0.031 | 23.9 |
| 291.5 | 0.798 | 5.78 | -0.966 | -- | -- | -- | -- | 0.0949 | -- | -- | -- | -- | -- |
| 284.28 | 0.789 | 5.74 | -- | 0.726 | -- | -- | -- | 0.216 | 13.9 | -- | -- | -- | -- |
| 238.95 | 0.72 | 5.82 | -- | -- | -1.96 | -- | -- | -0.149 | -- | 29.28 | 14 | 0.29 | 23.6 |
| 316.11 | 0.83 | 5.75 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.83 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 2 | 168.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 21 |
| 3 | 169.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 34 | 176.16 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 37 | 176.85 | temperature | 10 | 90 | > th | dose dependent | sin | 6 | NA |
| 131 | 183.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 158 | 185.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 169 | 185.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 182 | 186.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 185 | 186.11 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 192 | 186.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 198 | 186.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 211 | 186.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 231 | 187.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 252 | 188.29 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 22 |
| 262 | 188.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 309 | 189.66 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 324 | 189.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 330 | 190.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 347 | 190.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 389 | 191.43 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 15 |
| 398 | 191.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 435 | 192.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 440 | 192.24 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 470 | 192.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 493 | 193.26 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 501 | 193.43 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 13 |
| 740 | 196.54 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 881 | 197.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 884 | 197.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 911 | 198.09 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 8 |
| 975 | 198.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 981 | 198.58 | temperature | 20 | 10 | > th | dose independent | sin | 5 | NA |