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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0351500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.47 (0.0683) R2 : 0.401
β1 : -3.75 (0.256) R2dD : 0.307 R2D : 0.156
β2 : 1.05 (0.168) R2dC : 0.0525 R2C : 0.0201
β3 : 1.61 (0.205) R2dE : 0.0861 R2E : -0.000383
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.14 (0.146) R2dN8 : 0.107 R2N8 : 0.0342
σ : 1.28
deviance : 750.17
__
_____
C
peak time of C : 9.38
E
wheather : temperature
threshold : 26.4
memory length : 1140
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 7.96
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
736.8 1.28 4.64 -5.05 1.06 2.24 -1.4 -6.28 -1.46 9.46 25.97 1167 8.65 --
744.79 1.27 4.47 -3.77 1.04 1.61 -1.39 -- -1.14 9.25 26.4 1146 7.63 --
743.57 1.27 4.64 -5 1.05 2.23 -- -5.94 -1.43 9.39 26.12 1168 8.38 --
750.17 1.28 4.47 -3.75 1.05 1.61 -- -- -1.14 9.38 26.4 1140 7.96 --
803.79 1.32 4.65 -5.02 -- 2.25 -- -6.11 -1.36 -- 26.25 1216 7.38 --
838.68 1.36 4.48 -3.3 1.07 -- -1.39 -- -1.19 8.15 -- -- -- --
844.47 1.36 4.48 -3.34 1.07 -- -- -- -1.19 8.04 -- -- -- --
811.9 1.33 4.49 -3.75 -- 1.56 -- -- -1.11 -- 26.41 1201 7.45 --
1102.36 1.55 4.38 -- 1.05 0.932 -- -- -0.665 9.01 28.5 1171 6.88 --
907.49 1.41 4.51 -3.33 -- -- -- -- -1.17 -- -- -- -- --
1138.21 1.58 4.4 -- 1.05 -- -- -- -0.815 8.26 -- -- -- --
1163.66 1.59 4.41 -- -- 0.958 -- -- -0.728 -- 26.6 1164 6.77 --
1199.7 1.62 4.42 -- -- -- -- -- -0.805 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 750.59 humidity 60 4320 < th dose dependent rect. 16 4
14 750.62 humidity 60 4320 < th dose dependent rect. 16 2
16 751.66 atmosphere 1005 30 > th dose independent rect. 4 6
18 752.40 humidity 70 4320 < th dose dependent rect. 18 1
33 753.56 temperature 25 1440 > th dose dependent rect. 15 8
39 754.60 humidity 70 4320 < th dose independent rect. 18 2
52 754.89 temperature 25 1440 > th dose dependent rect. 18 1
54 754.93 temperature 25 1440 > th dose dependent rect. 18 5
74 755.24 humidity 50 4320 > th dose independent rect. 15 2
88 755.90 temperature 25 1440 > th dose dependent rect. 15 16
98 756.32 humidity 50 4320 > th dose independent rect. 13 4
104 756.42 temperature 30 1440 < th dose independent rect. 14 14
107 756.45 temperature 30 1440 < th dose independent rect. 14 17
116 756.55 temperature 30 1440 < th dose independent rect. 14 11
119 756.57 temperature 30 1440 < th dose independent rect. 14 6
123 756.65 temperature 30 1440 > th dose independent rect. 14 5
146 756.80 wind 9 43200 > th dose independent rect. 11 20
149 756.85 wind 9 43200 > th dose dependent rect. 11 19
151 756.92 temperature 25 1440 > th dose dependent rect. 15 1
154 756.98 temperature 25 1440 > th dose dependent sin 14 NA
161 757.19 wind 9 43200 > th dose dependent rect. 11 14
162 757.20 wind 9 43200 > th dose dependent rect. 11 16
192 757.47 humidity 50 4320 > th dose independent rect. 15 14
205 757.60 humidity 50 4320 > th dose independent rect. 15 5
206 757.60 humidity 50 4320 > th dose independent rect. 15 16
207 757.60 wind 9 43200 > th dose independent rect. 13 17
220 757.74 humidity 50 4320 > th dose independent rect. 15 10
228 757.84 atmosphere 1005 10 > th dose independent rect. 2 8
230 757.86 wind 9 43200 < th dose independent rect. 11 21
248 758.21 wind 9 43200 < th dose independent rect. 13 17
255 758.35 wind 9 43200 > th dose independent rect. 13 11
264 758.45 temperature 30 1440 > th dose independent sin 13 NA
266 758.46 temperature 30 1440 < th dose independent sin 13 NA
267 758.46 wind 9 43200 < th dose independent rect. 13 11
273 758.49 wind 9 43200 > th dose dependent rect. 13 10
279 758.59 temperature 30 1440 < th dose independent rect. 15 1
299 758.86 wind 7 43200 > th dose dependent rect. 12 2
303 758.89 temperature 25 1440 > th dose dependent rect. 20 2
314 758.98 wind 9 43200 < th dose independent rect. 13 13
334 759.21 wind 9 43200 > th dose independent sin 19 NA
341 759.28 temperature 30 1440 > th dose independent rect. 15 1
344 759.33 wind 9 43200 > th dose independent rect. 10 11
354 759.43 wind 9 43200 < th dose independent sin 20 NA
391 759.61 humidity 50 4320 > th dose independent sin 12 NA
399 759.67 wind 7 43200 > th dose dependent rect. 10 6
413 759.83 wind 9 43200 < th dose independent rect. 10 11
414 759.83 wind 7 43200 > th dose dependent rect. 11 4
425 759.92 wind 9 43200 > th dose independent rect. 10 5
435 760.00 wind 9 43200 < th dose independent rect. 9 6
459 760.05 humidity 80 1440 < th dose dependent rect. 16 17
536 760.60 humidity 60 4320 > th dose independent rect. 17 12
562 760.66 wind 9 43200 < th dose independent rect. 18 22
569 760.73 humidity 60 4320 > th dose independent rect. 17 3
572 760.77 wind 9 43200 < th dose independent rect. 12 3
582 760.82 humidity 60 4320 > th dose independent rect. 17 14
583 760.82 wind 7 43200 > th dose dependent rect. 3 13
589 760.84 humidity 60 4320 > th dose independent rect. 17 8
602 760.89 wind 7 43200 > th dose dependent rect. 24 16
629 760.99 wind 9 43200 > th dose independent rect. 19 21
644 761.09 wind 9 43200 > th dose independent rect. 12 3
650 761.13 wind 9 43200 < th dose independent rect. 3 12
807 761.85 wind 9 43200 < th dose independent rect. 3 18
845 761.93 wind 9 43200 < th dose independent rect. 3 20
867 762.03 wind 7 43200 > th dose independent rect. 3 13
870 762.04 humidity 80 1440 < th dose dependent sin 13 NA
918 762.15 humidity 50 4320 > th dose independent rect. 13 15
925 762.19 atmosphere 1000 90 > th dose dependent rect. 2 7
928 762.20 wind 9 43200 < th dose independent rect. 22 17
938 762.27 wind 7 43200 > th dose independent rect. 24 16
940 762.27 humidity 50 4320 > th dose independent rect. 13 18
973 762.37 humidity 50 4320 > th dose independent rect. 13 12
980 762.40 wind 7 43200 > th dose dependent sin 21 NA
983 762.41 humidity 50 4320 > th dose independent rect. 13 7