Os06g0349800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0349800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.68 | 0.584 | 10.1 | 1.11 | 3.08 | 1.61 | -0.167 | 0.874 | 0.911 | 16.1 | 19.6 | 6399 | -- | -- |
| 155.58 | 0.581 | 10.1 | 1.1 | 3.05 | 1.38 | -0.125 | -- | 0.898 | 16 | 19.6 | 6381 | -- | -- |
| 154.07 | 0.578 | 10.1 | 1.13 | 3.08 | 1.67 | -- | 1.12 | 0.943 | 16.1 | 19.3 | 6341 | -- | -- |
| 155.5 | 0.581 | 10.1 | 1.03 | 3.07 | 1.39 | -- | -- | 0.891 | 16.1 | 19.66 | 6378 | -- | -- |
| 651.34 | 1.2 | 10 | 1.54 | -- | 1.17 | -- | 0.0823 | 1.03 | -- | 19.3 | 6341 | -- | -- |
| 185.24 | 0.638 | 10 | 1.98 | 3.07 | -- | -0.194 | -- | 1.28 | 16.1 | -- | -- | -- | -- |
| 185.35 | 0.638 | 10 | 1.98 | 3.06 | -- | -- | -- | 1.28 | 16.1 | -- | -- | -- | -- |
| 639.3 | 1.18 | 10 | 1.58 | -- | 1.17 | -- | -- | 1 | -- | 19.9 | 6172 | -- | -- |
| 163.35 | 0.595 | 10.1 | -- | 3.09 | 1.92 | -- | -- | 0.727 | 16.1 | 18.6 | 16574 | -- | -- |
| 695.33 | 1.23 | 10 | 1.85 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 288.21 | 0.794 | 10.1 | -- | 3.03 | -- | -- | -- | 1.06 | 16.1 | -- | -- | -- | -- |
| 673.51 | 1.21 | 10.1 | -- | -- | 1.92 | -- | -- | 0.639 | -- | 18.42 | 16273 | -- | -- |
| 785.76 | 1.31 | 10 | -- | -- | -- | -- | -- | 0.99 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 3 | 143.22 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 4 | 143.91 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 7 | 148.70 | humidity | 90.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 8 | 148.70 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 10 | 149.57 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 14 | 150.05 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 15 | 150.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 21 | 150.82 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 25 | 151.24 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 31 | 151.57 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 35 | 151.65 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 48 | 152.04 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 49 | 152.10 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 52 | 152.18 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 56 | 152.23 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 74 | 152.31 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 76 | 152.36 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 79 | 152.40 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 82 | 152.42 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 85 | 152.43 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 21 |
| 98 | 152.70 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 102 | 152.73 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 124 | 152.80 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 128 | 152.83 | humidity | 60.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 148 | 152.87 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 12 | 22 |
| 149 | 152.88 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 150 | 152.89 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 169 | 152.90 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 8 |
| 179 | 152.95 | radiation | 40.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 181 | 152.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 194 | 153.01 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 206 | 153.05 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 240 | 153.12 | radiation | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 347 | 153.19 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 348 | 153.20 | radiation | 20.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 402 | 153.28 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 471 | 153.40 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 478 | 153.42 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 17 |
| 542 | 153.53 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 560 | 153.53 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 577 | 153.53 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 1 | 15 |
| 593 | 153.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 594 | 153.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 628 | 153.60 | radiation | 30.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 662 | 153.66 | humidity | 60.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 664 | 153.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 676 | 153.68 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 679 | 153.69 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 683 | 153.69 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 12 | 10 |
| 686 | 153.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 689 | 153.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 701 | 153.71 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 21 |
| 789 | 153.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 792 | 153.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 793 | 153.83 | radiation | 20.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 815 | 153.86 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 24 | 17 |
| 827 | 153.87 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 15 |
| 964 | 154.01 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 966 | 154.02 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 967 | 154.02 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 968 | 154.02 | radiation | 30.0 | 43200 | < th | dose dependent | no | NA | NA |
| 970 | 154.02 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 6 | 11 |
| 983 | 154.02 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 3 | 22 |