Os06g0349700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0349700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 279.55 | 0.786 | 2.9 | 0.139 | 0.0913 | -3.4 | 0.139 | -3.7 | 0.0719 | 24 | 9 | 29 | -- | -- |
| 280.09 | 0.779 | 2.89 | 0.115 | 0.091 | -2.42 | 0.0691 | -- | 0.074 | 23.8 | 9.002 | 27 | -- | -- |
| 279.62 | 0.779 | 2.9 | 0.133 | 0.0915 | -3.35 | -- | -3.44 | 0.072 | 23.6 | 9 | 27 | -- | -- |
| 280.11 | 0.779 | 2.89 | 0.114 | 0.0903 | -2.43 | -- | -- | 0.0739 | 23.6 | 9.005 | 27 | -- | -- |
| 280.14 | 0.78 | 2.9 | 0.133 | -- | -3.29 | -- | -3.4 | 0.0718 | -- | 9.013 | 27 | -- | -- |
| 293.83 | 0.804 | 2.9 | -0.03 | 0.0491 | -- | -0.556 | -- | 0.0233 | 16.7 | -- | -- | -- | -- |
| 294.43 | 0.804 | 2.9 | -0.0339 | 0.0761 | -- | -- | -- | 0.0203 | 20 | -- | -- | -- | -- |
| 280.62 | 0.78 | 2.89 | 0.113 | -- | -2.38 | -- | -- | 0.074 | -- | 9.033 | 27 | -- | -- |
| 280.43 | 0.78 | 2.89 | -- | 0.0906 | -2.35 | -- | -- | 0.0602 | 23.6 | 9.006 | 26 | -- | -- |
| 294.75 | 0.802 | 2.9 | -0.0346 | -- | -- | -- | -- | 0.0193 | -- | -- | -- | -- | -- |
| 294.46 | 0.803 | 2.9 | -- | 0.0763 | -- | -- | -- | 0.024 | 20 | -- | -- | -- | -- |
| 280.94 | 0.781 | 2.89 | -- | -- | -2.31 | -- | -- | 0.0603 | -- | 9.012 | 26 | -- | -- |
| 294.78 | 0.801 | 2.9 | -- | -- | -- | -- | -- | 0.0231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 269.08 | wind | 7.0 | 30 | > th | dose independent | rect. | 21 | 5 |
| 2 | 269.08 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 3 | 269.09 | wind | 7.0 | 90 | > th | dose dependent | rect. | 19 | 3 |
| 5 | 269.11 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 6 | 269.15 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 64 | 271.52 | wind | 9.0 | 30 | < th | dose independent | sin | 8 | NA |
| 68 | 272.39 | wind | 9.0 | 30 | > th | dose dependent | sin | 8 | NA |
| 71 | 272.92 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 6 |
| 72 | 272.92 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 6 |
| 73 | 273.07 | wind | 9.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 75 | 273.11 | wind | 9.0 | 30 | > th | dose independent | sin | 9 | NA |
| 81 | 273.32 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 84 | 273.49 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 5 |
| 88 | 273.49 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 5 |
| 147 | 275.09 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 15 |
| 199 | 276.19 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 9 |
| 219 | 276.19 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 364 | 278.69 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 372 | 278.75 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 376 | 278.80 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 378 | 278.80 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 402 | 278.92 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 413 | 278.92 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 457 | 279.71 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 11 |
| 484 | 279.94 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 10 | 6 |
| 538 | 280.23 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 6 |
| 548 | 280.23 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 6 |
| 587 | 280.44 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 11 |
| 591 | 280.49 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 6 |
| 614 | 280.67 | wind | 7.0 | 720 | < th | dose independent | rect. | 22 | 17 |
| 615 | 280.68 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 660 | 280.97 | temperature | 25.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 672 | 281.01 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 727 | 281.04 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 730 | 281.04 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 733 | 281.06 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 6 |
| 741 | 281.11 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 15 |
| 753 | 281.16 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 16 |
| 763 | 281.27 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 767 | 281.29 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 11 |
| 788 | 281.38 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 800 | 281.40 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 2 |
| 804 | 281.44 | wind | 9.0 | 30 | < th | dose independent | no | NA | NA |
| 810 | 281.46 | wind | 9.0 | 30 | > th | dose independent | no | NA | NA |
| 826 | 281.46 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 21 |
| 851 | 281.46 | wind | 9.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 922 | 281.62 | precipitation | 0.1 | 10 | > th | dose independent | sin | 18 | NA |
| 924 | 281.63 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 989 | 281.63 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |