FiT-DB / Search/ Help/ Sample detail

Os06g0346600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, uncharacterized transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.11 (0.0224) R2 : 0.0578
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.249 (0.0471) R2dN8 : 0.0747 R2N8 : 0.0578
σ : 0.422
deviance : 81.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.1 0.361 8.14 -0.484 0.363 0.375 0.163 1.62 0.15 16.5 60.46 4754 -- --
63.01 0.37 8.14 -0.536 0.369 0.411 -0.0468 -- 0.148 16.2 64 4756 -- --
59.17 0.358 8.14 -0.484 0.365 0.381 -- 1.6 0.15 16.4 60.26 4752 -- --
62.14 0.367 8.15 -0.564 0.326 0.492 -- -- 0.0605 16.6 64 4027 -- --
65.49 0.377 8.13 -0.506 -- 0.415 -- 1.75 0.15 -- 59 5572 -- --
66.49 0.382 8.13 -0.549 0.352 -- 0.0828 -- 0.196 16.2 -- -- -- --
66.51 0.382 8.12 -0.548 0.352 -- -- -- 0.196 16.2 -- -- -- --
67.82 0.384 8.16 -0.568 -- 0.544 -- -- 0.0426 -- 64.23 4052 -- --
62.48 0.368 8.13 -- 0.319 0.721 -- -- 0.14 16.3 50 4376 -- --
73.22 0.4 8.12 -0.562 -- -- -- -- 0.187 -- -- -- -- --
74.42 0.404 8.11 -- 0.363 -- -- -- 0.257 16.2 -- -- -- --
68.36 0.385 8.13 -- -- 0.75 -- -- 0.13 -- 50 4376 -- --
81.55 0.422 8.11 -- -- -- -- -- 0.249 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.54 humidity 50.0 270 > th dose independent rect. 6 18
3 54.83 temperature 10.0 43200 > th dose independent rect. 10 6
4 54.90 wind 1.0 270 > th dose independent rect. 13 16
9 55.29 humidity 50.0 30 > th dose independent rect. 9 18
10 55.30 wind 1.0 270 > th dose independent rect. 24 6
17 55.84 temperature 10.0 270 > th dose dependent rect. 19 16
19 55.86 radiation 10.0 270 < th dose independent rect. 15 10
21 55.92 wind 5.0 10 < th dose independent rect. 3 6
26 56.01 precipitation 0.1 10 < th dose independent rect. 3 6
27 56.01 precipitation 0.1 10 < th dose dependent rect. 3 6
39 56.20 humidity 50.0 270 > th dose independent rect. 5 8
41 56.23 precipitation 0.1 270 < th dose independent rect. 13 16
42 56.23 precipitation 0.1 270 < th dose dependent rect. 13 16
44 56.24 precipitation 0.1 10 < th dose independent rect. 9 18
45 56.24 precipitation 0.1 10 < th dose dependent rect. 9 18
48 56.30 temperature 10.0 10 > th dose independent rect. 3 6
50 56.30 temperature 30.0 10 < th dose independent rect. 3 6
51 56.30 humidity 50.0 10 > th dose independent rect. 3 6
53 56.30 atmosphere 995.0 10 > th dose independent rect. 3 6
54 56.30 atmosphere 1015.0 10 < th dose independent rect. 3 6
55 56.30 temperature 10.0 10 > th dose independent rect. 9 18
65 56.32 temperature 10.0 10 > th dose dependent rect. 9 6
66 56.34 wind 1.0 270 > th dose independent rect. 11 8
67 56.34 atmosphere 995.0 10 > th dose independent rect. 9 18
71 56.36 radiation 10.0 270 < th dose dependent rect. 14 11
72 56.38 radiation 40.0 30 < th dose independent rect. 3 6
74 56.38 wind 9.0 10 < th dose independent rect. 9 18
80 56.44 precipitation 0.1 270 < th dose independent rect. 24 6
82 56.44 precipitation 0.1 270 < th dose dependent rect. 24 6
85 56.46 precipitation 0.1 270 < th dose independent rect. 11 9
87 56.46 precipitation 0.1 270 < th dose dependent rect. 11 9
90 56.48 radiation 10.0 270 < th dose dependent rect. 6 19
92 56.49 wind 9.0 30 < th dose dependent rect. 3 6
93 56.50 wind 7.0 270 < th dose independent rect. 24 6
100 56.54 temperature 10.0 270 > th dose dependent rect. 9 1
105 56.56 wind 1.0 270 > th dose independent rect. 1 17
108 56.57 temperature 10.0 270 > th dose independent rect. 5 8
109 56.57 atmosphere 995.0 270 > th dose independent rect. 5 8
110 56.57 atmosphere 1015.0 270 < th dose independent rect. 5 8
111 56.57 precipitation 0.1 270 < th dose independent rect. 5 8
112 56.57 temperature 10.0 270 > th dose independent rect. 13 16
113 56.57 temperature 10.0 270 > th dose dependent rect. 6 6
114 56.57 precipitation 0.1 270 < th dose dependent rect. 5 8
125 56.63 atmosphere 995.0 270 > th dose independent rect. 13 16
128 56.64 temperature 10.0 270 > th dose independent rect. 24 6
129 56.64 temperature 30.0 270 < th dose independent rect. 24 6
130 56.64 humidity 50.0 270 > th dose independent rect. 24 6
133 56.64 atmosphere 995.0 270 > th dose independent rect. 24 6
134 56.64 radiation 20.0 270 < th dose independent rect. 24 6
137 56.64 wind 7.0 270 < th dose independent rect. 17 8
138 56.64 temperature 10.0 270 > th dose independent rect. 6 18
141 56.65 humidity 50.0 30 > th dose independent rect. 9 6
142 56.65 atmosphere 1015.0 270 < th dose independent rect. 24 6
145 56.65 wind 9.0 270 < th dose independent rect. 5 8
146 56.65 humidity 60.0 270 > th dose independent rect. 17 8
161 56.67 precipitation 0.1 270 < th dose independent rect. 1 16
163 56.67 wind 9.0 270 < th dose independent rect. 6 18
164 56.67 precipitation 0.1 270 < th dose dependent rect. 1 16
166 56.68 radiation 40.0 270 < th dose dependent rect. 24 7
170 56.71 humidity 50.0 270 > th dose independent rect. 19 16
181 56.72 precipitation 0.1 30 < th dose independent rect. 15 18
184 56.72 temperature 10.0 10 > th dose dependent rect. 9 18
185 56.72 precipitation 0.1 30 < th dose dependent rect. 15 18
188 56.75 wind 9.0 270 < th dose independent rect. 19 16
190 56.76 temperature 15.0 270 > th dose independent rect. 11 8
195 56.77 atmosphere 995.0 270 > th dose independent rect. 11 8
198 56.78 atmosphere 1015.0 270 < th dose independent rect. 11 8
199 56.78 temperature 10.0 270 > th dose independent rect. 19 16
200 56.78 atmosphere 995.0 270 > th dose independent rect. 19 16
201 56.78 temperature 30.0 270 < th dose dependent rect. 24 6
216 56.83 wind 9.0 270 < th dose independent rect. 13 16
230 56.87 temperature 10.0 10 > th dose independent rect. 9 6
234 56.87 atmosphere 995.0 10 > th dose independent rect. 9 6
236 56.87 atmosphere 1015.0 10 < th dose independent rect. 9 6
238 56.87 precipitation 0.1 10 < th dose independent rect. 9 6
251 56.87 temperature 10.0 10 > th dose independent rect. 15 18
253 56.87 temperature 30.0 270 < th dose dependent rect. 1 4
254 56.87 precipitation 0.1 10 < th dose dependent rect. 9 6
257 56.88 temperature 10.0 1440 > th dose independent rect. 10 6
260 56.88 temperature 10.0 1440 > th dose independent rect. 16 18
270 56.90 radiation 1.0 10 > th dose independent rect. 9 6
299 56.96 temperature 10.0 1440 > th dose independent rect. 3 7
302 56.96 atmosphere 995.0 1440 > th dose independent rect. 3 7
303 56.96 temperature 10.0 1440 > th dose independent rect. 10 17
312 56.98 wind 9.0 270 < th dose independent rect. 11 8
317 57.00 precipitation 0.1 270 < th dose independent rect. 6 18
319 57.00 precipitation 0.1 270 < th dose dependent rect. 6 18
321 57.01 wind 9.0 30 < th dose independent rect. 15 18
322 57.01 radiation 40.0 10 < th dose independent rect. 15 18
324 57.03 wind 9.0 10 < th dose independent rect. 9 6
332 57.05 temperature 10.0 270 > th dose independent rect. 17 8
337 57.05 temperature 10.0 270 > th dose independent rect. 1 16
338 57.05 atmosphere 1015.0 270 < th dose independent rect. 1 16
354 57.09 atmosphere 1015.0 1440 < th dose independent rect. 4 6
372 57.11 wind 1.0 30 > th dose independent rect. 9 6
388 57.12 temperature 30.0 270 < th dose independent rect. 18 7
407 57.14 precipitation 0.1 270 < th dose independent rect. 20 15
410 57.14 precipitation 0.1 270 < th dose dependent rect. 20 15
421 57.18 wind 9.0 270 < th dose independent rect. 1 16
435 57.20 humidity 70.0 270 > th dose independent rect. 15 10
473 57.25 atmosphere 995.0 270 > th dose independent rect. 1 16
520 57.33 wind 9.0 270 < th dose dependent rect. 17 8
535 57.35 atmosphere 1015.0 10 < th dose independent rect. 9 18
538 57.35 atmosphere 995.0 10 > th dose dependent rect. 3 6
560 57.39 radiation 1.0 270 < th dose independent rect. 9 16
567 57.40 precipitation 0.1 270 < th dose independent rect. 17 8
570 57.40 precipitation 0.1 270 < th dose dependent rect. 17 8
603 57.43 humidity 50.0 270 > th dose dependent rect. 24 6
666 57.49 radiation 1.0 270 > th dose independent rect. 5 8
709 57.53 humidity 50.0 4320 > th dose independent rect. 2 8
744 57.56 wind 9.0 14400 < th dose independent rect. 3 10
783 57.58 atmosphere 995.0 270 > th dose dependent rect. 24 6
792 57.59 atmosphere 995.0 30 > th dose independent rect. 15 18
830 57.65 atmosphere 995.0 270 > th dose independent rect. 18 7
833 57.65 wind 9.0 14400 < th dose independent rect. 23 14
848 57.66 humidity 50.0 270 > th dose dependent rect. 17 8
862 57.67 temperature 10.0 270 > th dose dependent rect. 19 5
873 57.68 atmosphere 1015.0 30 < th dose independent rect. 15 18
885 57.69 humidity 90.0 270 < th dose independent rect. 11 8
907 57.70 atmosphere 1015.0 270 < th dose independent rect. 6 18
921 57.72 humidity 50.0 270 > th dose independent rect. 9 1
927 57.72 atmosphere 995.0 270 > th dose independent rect. 6 18
930 57.72 precipitation 0.1 270 < th dose independent rect. 10 23
932 57.72 temperature 10.0 270 > th dose dependent rect. 18 7
940 57.72 precipitation 0.1 270 < th dose dependent rect. 10 23
965 57.74 radiation 40.0 10 < th dose dependent rect. 3 6
967 57.74 temperature 10.0 10 > th dose dependent rect. 20 19
968 57.75 precipitation 0.1 270 < th dose independent rect. 9 1
970 57.75 precipitation 0.1 270 < th dose dependent rect. 9 1
976 57.76 wind 9.0 14400 > th dose independent rect. 20 17
985 57.76 wind 9.0 270 < th dose dependent rect. 7 17