Os06g0331900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0005 family protein.
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Os06g0331900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function UPF0005 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.95 | 0.21 | 2.9 | -0.0296 | 0.0268 | 2.67 | 0.0539 | -9.54 | 0.049 | 10.4 | 0.4938 | 49 | -- | -- |
| 20.76 | 0.212 | 2.87 | 0.0314 | 0.0274 | -0.088 | 0.0952 | -- | 0.0445 | 10.8 | 1.402 | 18 | -- | -- |
| 19.95 | 0.208 | 2.9 | -0.0285 | 0.0289 | 2.69 | -- | -9.6 | 0.049 | 9.17 | 0.4937 | 48 | -- | -- |
| 20.77 | 0.212 | 2.87 | 0.035 | 0.035 | -0.0925 | -- | -- | 0.0442 | 8.38 | 1.382 | 39 | -- | -- |
| 20 | 0.208 | 2.9 | -0.0288 | -- | 2.71 | -- | -9.75 | 0.0491 | -- | 0.4747 | 48 | -- | -- |
| 20.77 | 0.214 | 2.87 | 0.0307 | 0.0293 | -- | 0.0932 | -- | 0.0447 | 10.6 | -- | -- | -- | -- |
| 20.78 | 0.213 | 2.87 | 0.0338 | 0.0358 | -- | -- | -- | 0.0445 | 8.37 | -- | -- | -- | -- |
| 20.84 | 0.213 | 2.88 | 0.0355 | -- | -0.106 | -- | -- | 0.0446 | -- | 1.417 | 50 | -- | -- |
| 20.81 | 0.212 | 2.88 | -- | 0.0352 | -0.0824 | -- | -- | 0.0405 | 8.31 | 1.508 | 45 | -- | -- |
| 20.85 | 0.213 | 2.88 | 0.034 | -- | -- | -- | -- | 0.0449 | -- | -- | -- | -- | -- |
| 20.81 | 0.213 | 2.88 | -- | 0.036 | -- | -- | -- | 0.0407 | 8.3 | -- | -- | -- | -- |
| 20.87 | 0.213 | 2.88 | -- | -- | -0.101 | -- | -- | 0.0408 | -- | 1.761 | 36 | -- | -- |
| 20.88 | 0.213 | 2.88 | -- | -- | -- | -- | -- | 0.0411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.07 | wind | 7.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 3 | 18.10 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 4 | 18.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 7 | 18.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 11 | 18.10 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 21 | 18.10 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 22 | 18.10 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 23 | 18.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 43 | 18.10 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 46 | 18.10 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 49 | 18.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 54 | 18.11 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 55 | 18.11 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 58 | 18.11 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 61 | 18.11 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 62 | 18.11 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 65 | 18.11 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 66 | 18.11 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 68 | 18.11 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 73 | 18.11 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 74 | 18.11 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 75 | 18.11 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 80 | 18.11 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 84 | 18.12 | wind | 5.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 88 | 18.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 90 | 18.12 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 97 | 18.13 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 98 | 18.13 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 100 | 18.13 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 101 | 18.13 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 105 | 18.18 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 117 | 18.24 | wind | 3.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 123 | 18.26 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 124 | 18.26 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 149 | 18.26 | wind | 3.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 172 | 18.30 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 310 | 18.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 311 | 18.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 318 | 18.79 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 325 | 18.82 | wind | 7.0 | 10 | > th | dose independent | rect. | 21 | 8 |
| 336 | 18.82 | wind | 7.0 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 416 | 18.92 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 422 | 18.92 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 430 | 18.95 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 440 | 18.95 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 459 | 19.00 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 460 | 19.00 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 575 | 19.29 | wind | 7.0 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 586 | 19.34 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 10 |
| 590 | 19.35 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 631 | 19.45 | wind | 9.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 697 | 19.52 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 708 | 19.54 | wind | 3.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 709 | 19.54 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 740 | 19.58 | wind | 3.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 741 | 19.58 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 744 | 19.58 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 11 |
| 792 | 19.62 | precipitation | 0.1 | 30 | > th | dose independent | sin | 4 | NA |
| 801 | 19.62 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 4 | NA |
| 810 | 19.62 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 823 | 19.64 | precipitation | 0.1 | 30 | < th | dose independent | sin | 4 | NA |
| 857 | 19.64 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 4 | NA |
| 888 | 19.65 | wind | 3.0 | 270 | < th | dose independent | sin | 10 | NA |
| 992 | 19.70 | wind | 3.0 | 270 | > th | dose independent | sin | 10 | NA |