Os06g0329900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SAM dependent carboxyl methyltransferase family protein.
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Os06g0329900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SAM dependent carboxyl methyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 252.51 | 0.747 | 6.31 | 1.1 | 4.62 | -0.841 | 1.48 | -2.14 | 1.04 | 17.1 | 69.96 | 1446 | -- | -- |
| 259.56 | 0.75 | 6.3 | 1.36 | 4.63 | -0.986 | 1.66 | -- | 1.04 | 17.2 | 68.44 | 1340 | -- | -- |
| 257.99 | 0.748 | 6.3 | 1.11 | 4.61 | -0.855 | -- | -2.04 | 1.05 | 17.1 | 69.82 | 1420 | -- | -- |
| 265.55 | 0.759 | 6.28 | 1.4 | 4.58 | -1.02 | -- | -- | 1.06 | 17.2 | 68.46 | 1346 | -- | -- |
| 1264.54 | 1.67 | 6.21 | 0.922 | -- | 1.46 | -- | 0.775 | 0.98 | -- | 69.98 | 1283 | -- | -- |
| 298.8 | 0.81 | 6.28 | 1.18 | 4.67 | -- | 1.68 | -- | 1.05 | 17.1 | -- | -- | -- | -- |
| 305.9 | 0.819 | 6.28 | 1.18 | 4.68 | -- | -- | -- | 1.05 | 17.1 | -- | -- | -- | -- |
| 1180.65 | 1.61 | 6.23 | 0.879 | -- | 1.65 | -- | -- | 0.92 | -- | 73.87 | 1261 | -- | -- |
| 302.83 | 0.81 | 6.25 | -- | 4.71 | -1.51 | -- | -- | 1.26 | 17.2 | 75 | 3510 | -- | -- |
| 1455.17 | 1.78 | 6.23 | 1.01 | -- | -- | -- | -- | 0.935 | -- | -- | -- | -- | -- |
| 342.47 | 0.866 | 6.31 | -- | 4.66 | -- | -- | -- | 0.922 | 17.1 | -- | -- | -- | -- |
| 1200.98 | 1.62 | 6.25 | -- | -- | 1.66 | -- | -- | 0.822 | -- | 73.87 | 1261 | -- | -- |
| 1482.12 | 1.8 | 6.25 | -- | -- | -- | -- | -- | 0.823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 237.37 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 4 | 238.16 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 9 | 240.22 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 13 | 241.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 14 | 241.75 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 15 | 241.79 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 16 | 241.84 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 20 | 242.00 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 33 | 243.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 56 | 244.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 68 | 244.67 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 82 | 245.31 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 86 | 245.47 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 95 | 245.67 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 104 | 245.80 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 109 | 246.03 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 113 | 246.25 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 116 | 246.29 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 140 | 247.30 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 240 | 248.97 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 249 | 249.03 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 266 | 249.26 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 273 | 249.33 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 280 | 249.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 281 | 249.38 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 336 | 249.87 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 20 | 18 |
| 341 | 249.91 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 375 | 250.09 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 22 | 16 |
| 377 | 250.12 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 401 | 250.23 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 412 | 250.29 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 425 | 250.35 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 427 | 250.35 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 454 | 250.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 484 | 250.65 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 492 | 250.68 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 525 | 250.77 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 543 | 250.85 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 571 | 250.95 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 587 | 250.99 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 593 | 251.02 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 594 | 251.02 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 697 | 251.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 698 | 251.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 732 | 251.51 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 771 | 251.62 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 803 | 251.72 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 817 | 251.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 819 | 251.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 876 | 251.94 | humidity | 70.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 878 | 251.94 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 889 | 251.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 895 | 251.98 | humidity | 70.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 897 | 251.99 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 949 | 252.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 983 | 252.22 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 984 | 252.22 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 986 | 252.23 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 8 | 12 |