Os06g0324000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0324000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.26 | 0.333 | 9.12 | 0.801 | 0.92 | 3.59 | 0.00439 | 8.87 | 0.276 | 23.6 | 8.792 | 42 | -- | -- |
| 58.97 | 0.36 | 9.15 | 0.965 | 0.938 | 0.0448 | 0.0535 | -- | 0.3 | 23.7 | 8.792 | 42 | -- | -- |
| 50.26 | 0.33 | 9.12 | 0.801 | 0.92 | 3.59 | -- | 8.88 | 0.277 | 23.6 | 8.786 | 42 | -- | -- |
| 53.62 | 0.341 | 9.16 | 0.886 | 0.899 | 1.23 | -- | -- | 0.273 | 23.6 | 8.7 | 31 | -- | -- |
| 103.07 | 0.473 | 9.11 | 0.805 | -- | 4 | -- | 8.68 | 0.281 | -- | 8.8 | 42 | -- | -- |
| 58.98 | 0.36 | 9.15 | 0.969 | 0.939 | -- | 0.0472 | -- | 0.301 | 23.7 | -- | -- | -- | -- |
| 58.99 | 0.36 | 9.15 | 0.967 | 0.939 | -- | -- | -- | 0.301 | 23.7 | -- | -- | -- | -- |
| 104.73 | 0.477 | 9.14 | 0.885 | -- | 1.71 | -- | -- | 0.268 | -- | 8.692 | 19 | -- | -- |
| 73.16 | 0.398 | 9.19 | -- | 0.914 | 1.78 | -- | -- | 0.145 | 23.9 | 8.702 | 188 | -- | -- |
| 114.41 | 0.5 | 9.13 | 0.994 | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
| 83.64 | 0.428 | 9.17 | -- | 0.95 | -- | -- | -- | 0.193 | 23.8 | -- | -- | -- | -- |
| 124.56 | 0.52 | 9.16 | -- | -- | 2.01 | -- | -- | 0.161 | -- | 8.777 | 44 | -- | -- |
| 140.49 | 0.553 | 9.15 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.52 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 2 | 47.63 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 14 | 48.48 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 39 | 49.30 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 55 | 49.30 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 76 | 49.44 | temperature | 20.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 115 | 50.31 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 6 |
| 117 | 50.34 | wind | 9.0 | 30 | > th | dose dependent | rect. | 17 | 21 |
| 132 | 50.61 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 133 | 50.61 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 151 | 50.70 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 159 | 50.75 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 160 | 50.76 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 161 | 50.77 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 163 | 50.77 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 198 | 51.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 203 | 51.02 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 15 |
| 226 | 51.14 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 230 | 51.16 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 11 |
| 265 | 51.25 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 271 | 51.25 | wind | 9.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 275 | 51.27 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 280 | 51.28 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 281 | 51.28 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 24 | 3 |
| 288 | 51.29 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 290 | 51.29 | wind | 9.0 | 30 | > th | dose dependent | no | NA | NA |
| 293 | 51.29 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 7 |
| 309 | 51.29 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 316 | 51.29 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 21 |
| 336 | 51.29 | wind | 9.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 346 | 51.30 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 9 |
| 348 | 51.31 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 383 | 51.37 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 408 | 51.40 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 414 | 51.41 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 423 | 51.42 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 466 | 51.43 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 474 | 51.43 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 486 | 51.44 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 496 | 51.45 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 502 | 51.46 | wind | 9.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 522 | 51.49 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 561 | 51.53 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 578 | 51.55 | temperature | 20.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 585 | 51.55 | wind | 9.0 | 30 | > th | dose dependent | sin | 21 | NA |
| 640 | 51.58 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 643 | 51.58 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 11 |
| 644 | 51.59 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 664 | 51.60 | wind | 9.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 673 | 51.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 13 |
| 685 | 51.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 688 | 51.62 | temperature | 20.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 694 | 51.63 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 698 | 51.63 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 716 | 51.65 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 718 | 51.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 726 | 51.66 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 7 |
| 735 | 51.68 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 19 | NA |
| 769 | 51.72 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 15 |
| 790 | 51.73 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 13 | 16 |
| 793 | 51.73 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 801 | 51.74 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 830 | 51.75 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 869 | 51.78 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 6 |
| 873 | 51.78 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 917 | 51.80 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 945 | 51.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 16 |
| 969 | 51.84 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 990 | 51.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 991 | 51.86 | temperature | 15.0 | 14400 | > th | dose independent | sin | 14 | NA |