Os06g0321900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0321900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 246.05 | 0.737 | 4.28 | -0.546 | 1.68 | 1.77 | 0.106 | -2.46 | 1.21 | 6.99 | 23 | 6 | -- | -- |
| 250.11 | 0.737 | 4.24 | -0.194 | 1.66 | 1.57 | 0.169 | -- | 1.31 | 7.08 | 22.5 | 5 | -- | -- |
| 246 | 0.73 | 4.28 | -0.533 | 1.7 | 1.8 | -- | -2.68 | 1.23 | 6.96 | 23.5 | 5 | -- | -- |
| 250.15 | 0.737 | 4.24 | -0.185 | 1.66 | 1.57 | -- | -- | 1.31 | 7.08 | 22.5 | 5 | -- | -- |
| 384.3 | 0.913 | 4.3 | -0.372 | -- | 1.29 | -- | -1.43 | 1.3 | -- | 19.6 | 2 | -- | -- |
| 289.31 | 0.797 | 4.19 | 0.123 | 1.53 | -- | 0.0354 | -- | 1.56 | 8.52 | -- | -- | -- | -- |
| 289.31 | 0.797 | 4.19 | 0.124 | 1.53 | -- | -- | -- | 1.56 | 8.51 | -- | -- | -- | -- |
| 385.89 | 0.915 | 4.27 | -0.13 | -- | 1.3 | -- | -- | 1.37 | -- | 17.9 | 2 | -- | -- |
| 251 | 0.738 | 4.23 | -- | 1.66 | 1.51 | -- | -- | 1.35 | 7.13 | 22.76 | 5 | -- | -- |
| 419.69 | 0.957 | 4.23 | 0.131 | -- | -- | -- | -- | 1.57 | -- | -- | -- | -- | -- |
| 289.72 | 0.796 | 4.19 | -- | 1.53 | -- | -- | -- | 1.54 | 8.51 | -- | -- | -- | -- |
| 386.24 | 0.915 | 4.27 | -- | -- | 1.23 | -- | -- | 1.39 | -- | 18.74 | 2 | -- | -- |
| 420.14 | 0.957 | 4.23 | -- | -- | -- | -- | -- | 1.56 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 232.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 9 | 234.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 21 | 236.41 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 24 | 236.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 47 | 239.12 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 48 | 239.12 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 54 | 239.30 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 55 | 239.31 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 63 | 239.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 13 |
| 71 | 239.60 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 78 | 239.65 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 80 | 239.68 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 138 | 240.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 154 | 240.31 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 21 | NA |
| 191 | 240.53 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 21 | NA |
| 193 | 240.53 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 9 | 18 |
| 195 | 240.54 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 215 | 240.62 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 22 | NA |
| 235 | 240.67 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 247 | 240.70 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 9 | 11 |
| 307 | 240.83 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 318 | 240.86 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 355 | 240.95 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 377 | 241.03 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 13 | NA |
| 451 | 241.20 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 452 | 241.20 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 457 | 241.22 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 3 |
| 519 | 241.34 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 539 | 241.39 | atmosphere | 1015 | 43200 | > th | dose dependent | no | NA | NA |
| 553 | 241.40 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 602 | 241.48 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 11 | 18 |
| 607 | 241.48 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 614 | 241.49 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 615 | 241.50 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 752 | 241.67 | atmosphere | 1015 | 43200 | > th | dose independent | no | NA | NA |
| 758 | 241.68 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 762 | 241.68 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 800 | 241.72 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 846 | 241.78 | atmosphere | 1015 | 43200 | < th | dose independent | no | NA | NA |
| 878 | 241.82 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 961 | 241.93 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 23 |