Os06g0321700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0321700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.39 | 0.426 | 9.7 | -1.47 | 0.691 | 1.39 | 0.586 | 0.975 | 0.247 | 1.13 | 20.8 | 1407 | -- | -- |
| 83.47 | 0.426 | 9.73 | -1.61 | 0.699 | 1.24 | 0.714 | -- | 0.173 | 0.954 | 21.3 | 1471 | -- | -- |
| 83.8 | 0.426 | 9.7 | -1.48 | 0.691 | 1.4 | -- | 1.04 | 0.248 | 1.21 | 20.81 | 1406 | -- | -- |
| 85.06 | 0.43 | 9.73 | -1.65 | 0.714 | 1.2 | -- | -- | 0.182 | 1.22 | 21.4 | 1503 | -- | -- |
| 111 | 0.491 | 9.69 | -1.46 | -- | 1.41 | -- | 1 | 0.25 | -- | 20.86 | 1196 | -- | -- |
| 123.88 | 0.522 | 9.66 | -1.13 | 0.737 | -- | 0.561 | -- | 0.519 | 1.17 | -- | -- | -- | -- |
| 125.16 | 0.524 | 9.66 | -1.15 | 0.737 | -- | -- | -- | 0.515 | 1.27 | -- | -- | -- | -- |
| 111.56 | 0.492 | 9.73 | -1.54 | -- | 1.11 | -- | -- | 0.175 | -- | 21.95 | 1101 | -- | -- |
| 142.88 | 0.557 | 9.68 | -- | 0.736 | 0.644 | -- | -- | 0.39 | 1.26 | 22.3 | 1461 | -- | -- |
| 158.73 | 0.589 | 9.65 | -1.12 | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
| 160.12 | 0.592 | 9.63 | -- | 0.718 | -- | -- | -- | 0.644 | 1.21 | -- | -- | -- | -- |
| 166.02 | 0.6 | 9.67 | -- | -- | 0.737 | -- | -- | 0.427 | -- | 22.31 | 1023 | -- | -- |
| 192 | 0.647 | 9.62 | -- | -- | -- | -- | -- | 0.655 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.32 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 84.07 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 19 |
| 4 | 84.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 84.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 84.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 7 | 84.42 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 11 | 84.51 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 16 |
| 13 | 84.53 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 14 | 84.59 | temperature | 25.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 15 | 84.60 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 19 | 84.66 | temperature | 20.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 35 | 84.92 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 36 | 84.93 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 57 | 85.18 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 22 |
| 63 | 85.26 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 70 | 85.31 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 19 |
| 76 | 85.34 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 85 | 85.40 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 10 |
| 87 | 85.42 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 13 | 16 |
| 93 | 85.45 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 94 | 85.46 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 127 | 85.59 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 129 | 85.60 | temperature | 20.0 | 720 | < th | dose independent | sin | 17 | NA |
| 145 | 85.63 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 147 | 85.63 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 178 | 85.71 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 195 | 85.75 | temperature | 20.0 | 1440 | < th | dose independent | sin | 15 | NA |
| 201 | 85.77 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 225 | 85.86 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 307 | 86.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 310 | 86.14 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 337 | 86.24 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 346 | 86.27 | temperature | 20.0 | 720 | < th | dose independent | sin | 21 | NA |
| 348 | 86.28 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 16 |
| 353 | 86.29 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 364 | 86.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 370 | 86.35 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 385 | 86.38 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 387 | 86.39 | temperature | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 423 | 86.48 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 504 | 86.69 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 546 | 86.86 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 618 | 87.13 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 675 | 87.39 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 716 | 87.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 767 | 87.78 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 786 | 87.88 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 793 | 87.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 797 | 87.90 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 822 | 87.98 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 824 | 87.99 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |