Os06g0318900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0318900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.99 | 0.607 | 3.24 | 0.129 | 0.00058 | 3.06 | 1.7 | 6.45 | -0.0823 | 16.6 | 89.75 | 1500 | 2.83 | 0.283 |
| 186.79 | 0.637 | 3.25 | 0.0999 | 0.0528 | 3.2 | 1.45 | -- | -0.0744 | 16.7 | 89.06 | 1438 | 2.97 | 0.358 |
| 174.09 | 0.615 | 3.24 | 0.123 | 0.0163 | 3.31 | -- | 6.14 | -0.0791 | 15.6 | 89.71 | 1504 | 2.83 | 0.233 |
| 181.37 | 0.627 | 3.24 | 0.11 | 0.0707 | 4.43 | -- | -- | -0.06 | 16.8 | 88.64 | 1618 | 3.05 | 0.0163 |
| 174.05 | 0.614 | 3.24 | 0.136 | -- | 3.4 | -- | 6.24 | -0.0738 | -- | 89.62 | 1505 | 2.82 | 0.244 |
| 272.49 | 0.774 | 3.27 | 0.146 | 0.0754 | -- | -1.27 | -- | -0.216 | 4.23 | -- | -- | -- | -- |
| 276.32 | 0.778 | 3.27 | 0.16 | 0.132 | -- | -- | -- | -0.209 | 7.87 | -- | -- | -- | -- |
| 181.58 | 0.628 | 3.24 | 0.119 | -- | 4.45 | -- | -- | -0.0586 | -- | 88.66 | 1618 | 3.04 | 0.0159 |
| 181.71 | 0.628 | 3.24 | -- | 0.0658 | 4.5 | -- | -- | -0.0663 | 15.7 | 88.6 | 1623 | 3.05 | 0.0166 |
| 277.26 | 0.778 | 3.27 | 0.162 | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
| 276.99 | 0.779 | 3.27 | -- | 0.133 | -- | -- | -- | -0.227 | 7.79 | -- | -- | -- | -- |
| 181.95 | 0.628 | 3.24 | -- | -- | 4.46 | -- | -- | -0.068 | -- | 88.66 | 1622 | 3.04 | 0.016 |
| 277.95 | 0.778 | 3.27 | -- | -- | -- | -- | -- | -0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.58 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 180.21 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 4 | 180.43 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 7 | 180.82 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 13 | 182.30 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 14 | 182.53 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 19 | 183.26 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 5 |
| 20 | 183.35 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 28 | 183.85 | wind | 9 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 58 | 184.39 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 60 | 184.44 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 64 | 184.46 | wind | 9 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 169 | 189.26 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 184 | 190.08 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 190 | 190.14 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 191 | 190.15 | wind | 7 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 228 | 191.36 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 230 | 191.48 | wind | 7 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 234 | 191.53 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 243 | 191.89 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 308 | 192.75 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 403 | 195.44 | humidity | 80 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 418 | 196.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 427 | 196.59 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 429 | 196.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 450 | 197.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 460 | 197.21 | humidity | 70 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 531 | 198.71 | atmosphere | 995 | 14400 | > th | dose independent | sin | 22 | NA |
| 534 | 198.73 | atmosphere | 995 | 14400 | < th | dose independent | sin | 22 | NA |
| 537 | 198.81 | wind | 5 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 550 | 199.00 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 555 | 199.15 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 587 | 199.70 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 626 | 200.19 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 22 | NA |
| 665 | 200.76 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 1 |
| 759 | 201.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 764 | 201.43 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 814 | 201.71 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 838 | 201.85 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 847 | 201.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 984 | 202.52 | atmosphere | 995 | 14400 | > th | dose independent | no | NA | NA |
| 991 | 202.53 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 992 | 202.53 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 23 |