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Os06g0315900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.44 (0.0174) R2 : 0.41
β1 : -1.06 (0.0636) R2dD : 0.37 R2D : 0.254
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.352 (0.0371) R2dN8 : 0.156 R2N8 : 0.0402
σ : 0.326
deviance : 48.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.73 0.269 9.44 -1.03 0.332 -0.338 0.971 1.38 -0.408 2.32 10 1456 -- --
35.88 0.279 9.44 -1 0.325 -0.347 1.01 -- -0.41 2.45 10 1444 -- --
34.09 0.272 9.45 -1.09 0.376 -0.298 -- 1.84 -0.414 3.09 19.91 1748 -- --
38.99 0.291 9.46 -1.06 0.408 -0.341 -- -- -0.436 2.97 19.97 1849 -- --
40.1 0.297 9.44 -1.01 -- 0.254 -- 0.785 -0.351 -- 19.91 1748 -- --
38.74 0.292 9.44 -1.04 0.317 -- 1.04 -- -0.353 2.34 -- -- -- --
42.67 0.306 9.45 -1.07 0.322 -- -- -- -0.36 2.65 -- -- -- --
43.39 0.308 9.45 -1.06 -- 0.259 -- -- -0.357 -- 19.91 1748 -- --
67.57 0.383 9.44 -- 0.319 -0.297 -- -- -0.357 3.18 19.93 16403 -- --
48.73 0.326 9.44 -1.06 -- -- -- -- -0.352 -- -- -- -- --
72.87 0.399 9.42 -- 0.301 -- -- -- -0.241 2.61 -- -- -- --
50.38 0.331 9.37 -- -- -0.838 -- -- -0.0299 -- 59.99 47520 -- --
78.19 0.413 9.42 -- -- -- -- -- -0.234 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.88 radiation 30 4320 < th dose independent rect. 16 5
2 30.92 radiation 10 1440 < th dose independent rect. 18 3
4 31.17 radiation 30 4320 < th dose independent rect. 16 8
8 31.30 radiation 10 1440 < th dose independent rect. 13 17
9 31.32 radiation 10 1440 < th dose independent sin 15 NA
11 31.36 radiation 20 4320 < th dose independent rect. 17 12
13 31.37 radiation 10 1440 < th dose independent rect. 12 19
25 31.51 radiation 30 4320 < th dose independent rect. 16 14
32 31.59 radiation 10 1440 < th dose independent rect. 13 12
36 31.60 radiation 10 1440 < th dose independent rect. 13 6
37 31.60 radiation 10 1440 < th dose independent rect. 13 9
51 31.68 radiation 40 4320 < th dose independent rect. 14 18
55 31.71 radiation 20 1440 < th dose independent rect. 11 2
85 31.82 humidity 50 43200 < th dose independent rect. 8 1
143 32.05 humidity 50 43200 > th dose independent rect. 8 1
150 32.09 temperature 20 1440 < th dose independent rect. 5 1
159 32.13 temperature 20 90 > th dose dependent rect. 19 21
171 32.21 radiation 10 4320 > th dose dependent rect. 16 16
172 32.22 temperature 20 1440 > th dose independent rect. 5 1
184 32.23 radiation 20 1440 < th dose independent rect. 11 4
201 32.26 temperature 20 10 > th dose dependent rect. 6 22
225 32.29 humidity 50 43200 > th dose independent rect. 21 12
226 32.31 radiation 30 4320 > th dose dependent rect. 14 18
227 32.33 humidity 50 43200 < th dose independent rect. 19 14
230 32.35 wind 9 43200 > th dose dependent rect. 16 1
234 32.37 humidity 50 43200 < th dose independent rect. 21 12
235 32.37 humidity 50 43200 > th dose independent rect. 19 14
236 32.38 wind 9 43200 > th dose independent rect. 16 1
240 32.39 temperature 20 1440 > th dose independent rect. 4 3
249 32.44 temperature 25 90 > th dose independent rect. 19 21
265 32.48 wind 9 43200 < th dose independent rect. 16 1
267 32.48 humidity 50 43200 > th dose independent rect. 24 9
270 32.48 humidity 60 43200 < th dose dependent rect. 20 13
272 32.49 wind 7 43200 > th dose independent rect. 11 1
273 32.49 radiation 30 14400 > th dose independent rect. 7 1
294 32.49 wind 7 43200 > th dose dependent rect. 11 1
337 32.62 wind 7 43200 < th dose independent rect. 11 1
347 32.64 humidity 80 43200 < th dose independent rect. 7 2
357 32.64 radiation 30 1440 < th dose dependent rect. 11 2
360 32.65 temperature 20 4320 < th dose independent rect. 22 1
361 32.65 radiation 20 1440 < th dose independent rect. 14 1
364 32.65 radiation 1 4320 > th dose dependent rect. 17 14
365 32.65 radiation 40 4320 < th dose dependent rect. 16 16
366 32.66 radiation 40 4320 < th dose independent sin 13 NA
371 32.68 temperature 20 4320 > th dose independent rect. 22 1
374 32.68 radiation 30 4320 < th dose dependent rect. 17 14
378 32.69 humidity 60 43200 < th dose dependent rect. 8 1
379 32.69 radiation 30 14400 > th dose dependent rect. 7 1
395 32.70 radiation 20 43200 < th dose independent rect. 5 1
401 32.72 humidity 80 43200 > th dose independent rect. 7 2
409 32.73 temperature 20 1440 < th dose independent rect. 22 8
410 32.73 radiation 20 43200 < th dose dependent rect. 12 1
414 32.74 humidity 80 43200 < th dose independent rect. 6 4
420 32.75 humidity 50 43200 > th dose independent rect. 21 7
422 32.76 radiation 10 1440 < th dose independent no NA NA
424 32.76 radiation 10 1440 < th dose independent rect. 5 18
426 32.76 radiation 10 1440 < th dose independent rect. 3 20
428 32.76 radiation 10 1440 < th dose independent rect. 1 21
432 32.76 radiation 10 1440 < th dose independent rect. 22 21
459 32.77 radiation 10 1440 < th dose independent rect. 5 14
529 32.81 temperature 20 1440 > th dose independent rect. 22 9
554 32.84 temperature 20 4320 > th dose independent rect. 18 6
559 32.84 temperature 25 90 < th dose independent rect. 4 16
564 32.85 humidity 70 43200 > th dose independent rect. 11 1
577 32.86 temperature 20 4320 < th dose independent rect. 18 6
582 32.86 radiation 10 1440 < th dose independent rect. 16 23
587 32.87 humidity 60 43200 < th dose dependent rect. 2 7
599 32.88 wind 7 43200 > th dose dependent rect. 10 3
605 32.89 humidity 70 43200 > th dose independent rect. 10 3
622 32.91 humidity 70 43200 > th dose independent rect. 7 8
652 32.94 radiation 30 4320 > th dose dependent rect. 14 3
694 32.97 wind 1 14400 > th dose independent rect. 22 4
707 32.98 humidity 70 43200 < th dose independent rect. 11 1
715 32.98 radiation 20 43200 < th dose independent rect. 18 12
725 32.99 radiation 20 43200 > th dose independent rect. 12 1
726 32.99 radiation 10 43200 < th dose independent rect. 13 1
815 32.99 temperature 30 10 < th dose dependent rect. 4 16
819 33.00 radiation 10 43200 > th dose independent rect. 5 4
866 33.02 wind 1 14400 < th dose independent rect. 21 5
899 33.02 humidity 50 43200 < th dose dependent rect. 17 16
905 33.03 humidity 70 43200 < th dose independent rect. 10 4
937 33.05 temperature 20 4320 < th dose independent rect. 18 1
968 33.06 radiation 20 43200 > th dose independent rect. 9 1
994 33.08 humidity 70 43200 > th dose independent rect. 10 12
997 33.09 humidity 70 43200 > th dose independent sin 23 NA