Os06g0314300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0314300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.11 | 0.415 | 8.79 | -1.15 | 1.2 | -0.974 | -0.13 | -3.89 | -0.0778 | 21.7 | 2.925 | 406 | -- | -- |
| 87.32 | 0.435 | 8.84 | -1.1 | 1.19 | -0.589 | -0.655 | -- | -0.115 | 21.9 | 2.337 | 576 | -- | -- |
| 78.03 | 0.411 | 8.78 | -1.15 | 1.21 | -0.999 | -- | -4.05 | -0.0754 | 21.8 | 2.9 | 457 | -- | -- |
| 88.83 | 0.439 | 8.84 | -1.07 | 1.18 | -0.529 | -- | -- | -0.125 | 22 | 2.233 | 574 | -- | -- |
| 136.24 | 0.544 | 8.75 | -0.786 | -- | 0.753 | -- | -3.89 | -0.11 | -- | -3.458 | 718 | -- | -- |
| 90.58 | 0.446 | 8.84 | -0.971 | 1.04 | -- | -0.47 | -- | -0.127 | 22.2 | -- | -- | -- | -- |
| 91.46 | 0.448 | 8.84 | -0.953 | 1.04 | -- | -- | -- | -0.126 | 22.3 | -- | -- | -- | -- |
| 145.41 | 0.562 | 8.82 | -0.728 | -- | 0.933 | -- | -- | -0.147 | -- | -5.773 | 712 | -- | -- |
| 84.62 | 0.428 | 8.78 | -- | 1.02 | 1.28 | -- | -- | 0.119 | 22.3 | -1.614 | 45499 | -- | -- |
| 157.01 | 0.586 | 8.81 | -0.937 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 115.39 | 0.502 | 8.81 | -- | 1.03 | -- | -- | -- | -0.0197 | 22.2 | -- | -- | -- | -- |
| 147.77 | 0.566 | 8.76 | -- | -- | 1.34 | -- | -- | 0.136 | -- | 1.561 | 45465 | -- | -- |
| 180.18 | 0.627 | 8.79 | -- | -- | -- | -- | -- | -0.0192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.57 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 2 | 72.57 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 3 | 72.67 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 12 |
| 4 | 72.69 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 5 | 72.76 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 6 | 72.79 | wind | 3.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 9 | 72.87 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 10 | 72.87 | wind | 3.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 12 | 72.91 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 13 | 72.92 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 15 | 72.97 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 17 | 72.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 19 | 73.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 34 | 73.42 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 41 | 73.52 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 8 |
| 47 | 73.57 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 48 | 73.60 | wind | 3.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 52 | 73.68 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 58 | 73.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 63 | 73.77 | wind | 3.0 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 68 | 73.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 22 | 13 |
| 73 | 73.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 76 | 73.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 77 | 73.98 | wind | 3.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 84 | 74.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 87 | 74.12 | wind | 3.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 94 | 74.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 97 | 74.20 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 99 | 74.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 101 | 74.22 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 4 | 7 |
| 102 | 74.23 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 113 | 74.29 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 6 | 9 |
| 125 | 74.37 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 163 | 74.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 176 | 74.67 | wind | 3.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 191 | 74.75 | wind | 3.0 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 211 | 74.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 213 | 74.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 216 | 74.85 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 220 | 74.86 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 223 | 74.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 226 | 74.88 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 227 | 74.89 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 229 | 74.90 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 230 | 74.90 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 240 | 74.93 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 271 | 75.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 275 | 75.04 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 304 | 75.12 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 309 | 75.14 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 316 | 75.15 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 318 | 75.15 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 319 | 75.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 320 | 75.16 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 332 | 75.19 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 344 | 75.21 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 356 | 75.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 367 | 75.27 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 372 | 75.28 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 385 | 75.30 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 420 | 75.36 | wind | 1.0 | 1440 | < th | dose independent | rect. | 4 | 21 |
| 437 | 75.40 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 443 | 75.40 | wind | 1.0 | 1440 | > th | dose independent | rect. | 4 | 21 |
| 464 | 75.43 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 475 | 75.45 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 21 |
| 479 | 75.47 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 483 | 75.47 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 490 | 75.48 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 494 | 75.49 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 523 | 75.55 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 543 | 75.56 | humidity | 90.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 551 | 75.57 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 562 | 75.59 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 573 | 75.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 575 | 75.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 576 | 75.61 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 595 | 75.64 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 611 | 75.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 622 | 75.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 12 |
| 623 | 75.67 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 624 | 75.67 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 626 | 75.67 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 632 | 75.68 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 666 | 75.72 | wind | 5.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 673 | 75.73 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 679 | 75.74 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 706 | 75.77 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 19 |
| 760 | 75.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 768 | 75.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 18 |
| 784 | 75.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 785 | 75.85 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 826 | 75.88 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 828 | 75.88 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 19 |
| 833 | 75.89 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 843 | 75.89 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 869 | 75.90 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 883 | 75.92 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 889 | 75.92 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 912 | 75.95 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 937 | 75.96 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 956 | 75.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |