Os06g0308900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Zinc finger DHHC domain containing protein 15.
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Os06g0308900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Zinc finger DHHC domain containing protein 15.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.6 | 0.238 | 9.71 | 0.602 | 0.262 | -1.14 | -0.115 | -0.344 | 0.139 | 8.61 | 10.15 | 12 | -- | -- |
| 25.67 | 0.238 | 9.71 | 0.647 | 0.27 | -1.15 | -0.16 | -- | 0.15 | 8.59 | 6.451 | 13 | -- | -- |
| 25.62 | 0.238 | 9.71 | 0.588 | 0.269 | -1.15 | -- | -0.404 | 0.135 | 8.68 | 10.15 | 12 | -- | -- |
| 25.76 | 0.238 | 9.71 | 0.643 | 0.271 | -1.15 | -- | -- | 0.15 | 8.65 | 10.15 | 12 | -- | -- |
| 28.42 | 0.248 | 9.72 | 0.602 | -- | -1.13 | -- | -0.377 | 0.133 | -- | 7.417 | 126 | -- | -- |
| 38.51 | 0.291 | 9.74 | 0.42 | 0.405 | -- | 0.0549 | -- | -0.011 | 5.06 | -- | -- | -- | -- |
| 38.52 | 0.291 | 9.75 | 0.42 | 0.405 | -- | -- | -- | -0.0113 | 5.07 | -- | -- | -- | -- |
| 28.53 | 0.249 | 9.72 | 0.656 | -- | -1.14 | -- | -- | 0.148 | -- | 10.16 | 133 | -- | -- |
| 35.64 | 0.28 | 9.73 | -- | 0.282 | -0.843 | -- | -- | 0.0422 | 7.28 | 10.15 | 12 | -- | -- |
| 47.14 | 0.321 | 9.75 | 0.435 | -- | -- | -- | -- | -0.000948 | -- | -- | -- | -- | -- |
| 43.18 | 0.307 | 9.76 | -- | 0.413 | -- | -- | -- | -0.0581 | 5.03 | -- | -- | -- | -- |
| 39.14 | 0.291 | 9.74 | -- | -- | -0.919 | -- | -- | 0.0513 | -- | 7.947 | 125 | -- | -- |
| 52.13 | 0.337 | 9.76 | -- | -- | -- | -- | -- | -0.0492 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 6 | 25.13 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 10 | 25.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 12 | 25.37 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 14 | 25.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 16 | 25.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 18 | 25.55 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 19 | 25.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 20 | 25.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 21 | 25.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 26 | 25.61 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 27 | 25.61 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 32 | 25.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 38 | 25.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 63 | 26.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 69 | 26.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 94 | 26.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 99 | 26.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 105 | 26.41 | temperature | 10 | 90 | > th | dose dependent | sin | 5 | NA |
| 128 | 26.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 177 | 26.87 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 180 | 26.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 184 | 26.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 196 | 26.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 207 | 26.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 238 | 27.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 256 | 27.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 299 | 27.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 338 | 27.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 401 | 27.67 | temperature | 25 | 10 | < th | dose dependent | sin | 23 | NA |
| 461 | 27.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 489 | 27.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 527 | 27.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 585 | 28.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 673 | 28.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |