Os06g0308800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF605 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0308800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF605 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.92 | 0.289 | 9.75 | 1.78 | 0.267 | -0.0581 | -0.0111 | 3.87 | 0.313 | 12.7 | 23.84 | 2104 | -- | -- |
| 43.88 | 0.309 | 9.87 | 0.749 | 0.248 | 0.285 | -0.389 | -- | 0.0429 | 11 | 24.55 | 6313 | -- | -- |
| 37.92 | 0.287 | 9.75 | 1.79 | 0.267 | -0.0636 | -- | 3.92 | 0.315 | 12.7 | 23.93 | 2109 | -- | -- |
| 41.98 | 0.302 | 9.85 | 0.748 | 0.282 | 0.341 | -- | -- | 0.11 | 12.8 | 30.36 | 2615 | -- | -- |
| 42.25 | 0.303 | 9.75 | 1.83 | -- | -0.118 | -- | 4.04 | 0.328 | -- | 23.84 | 2070 | -- | -- |
| 46.52 | 0.32 | 9.87 | 0.862 | 0.247 | -- | -0.245 | -- | 0.084 | 12.2 | -- | -- | -- | -- |
| 46.71 | 0.32 | 9.87 | 0.854 | 0.251 | -- | -- | -- | 0.0837 | 12.7 | -- | -- | -- | -- |
| 46.01 | 0.316 | 9.88 | 0.742 | -- | 0.321 | -- | -- | 0.0856 | -- | 30.1 | 6154 | -- | -- |
| 56.46 | 0.35 | 9.86 | -- | 0.297 | 0.49 | -- | -- | 0.0973 | 12.7 | 29.8 | 2591 | -- | -- |
| 50.66 | 0.333 | 9.87 | 0.845 | -- | -- | -- | -- | 0.0791 | -- | -- | -- | -- | -- |
| 65.92 | 0.38 | 9.89 | -- | 0.238 | -- | -- | -- | -0.0114 | 12.6 | -- | -- | -- | -- |
| 50.04 | 0.329 | 9.95 | -- | -- | 0.65 | -- | -- | -0.256 | -- | 20.8 | 47520 | -- | -- |
| 69.48 | 0.389 | 9.89 | -- | -- | -- | -- | -- | -0.0146 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.68 | temperature | 25.0 | 720 | < th | dose independent | rect. | 15 | 20 |
| 2 | 38.71 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 4 | 38.72 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 20 |
| 6 | 38.74 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 9 | 38.76 | radiation | 10.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 12 | 38.79 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 14 | 38.80 | temperature | 25.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 16 | 38.81 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 21 | 38.82 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 26 | 38.85 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 20 |
| 28 | 38.85 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 33 | 38.86 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 35 | 38.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 41 | 38.88 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 43 | 38.88 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 50 | 38.90 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 18 |
| 61 | 38.93 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 65 | 38.93 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 68 | 38.94 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 75 | 38.95 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 10 |
| 79 | 38.95 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 17 |
| 96 | 38.98 | temperature | 25.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 101 | 38.98 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 103 | 38.98 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 8 |
| 109 | 38.99 | temperature | 25.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 124 | 39.00 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 141 | 39.02 | wind | 1.0 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 196 | 39.07 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 197 | 39.07 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 230 | 39.09 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 240 | 39.09 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 260 | 39.11 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 284 | 39.12 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 307 | 39.13 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 311 | 39.14 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 21 |
| 328 | 39.15 | radiation | 1.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 382 | 39.18 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 410 | 39.19 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 455 | 39.20 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 462 | 39.21 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 10 | 22 |
| 483 | 39.21 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 522 | 39.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 545 | 39.24 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 547 | 39.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 555 | 39.24 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 574 | 39.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 576 | 39.25 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 577 | 39.25 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 584 | 39.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 585 | 39.25 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 8 | 5 |
| 620 | 39.26 | radiation | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 675 | 39.28 | temperature | 25.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 720 | 39.29 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 728 | 39.29 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 806 | 39.31 | temperature | 25.0 | 4320 | > th | dose independent | no | NA | NA |
| 896 | 39.33 | temperature | 25.0 | 720 | < th | dose independent | sin | 15 | NA |
| 899 | 39.33 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 944 | 39.34 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 977 | 39.35 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 980 | 39.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 6 |