Os06g0304700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0304700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.89 | 0.318 | 3.21 | -0.217 | 0.155 | -4.63 | 0.0143 | -21.2 | 0.0908 | 8.27 | 9.314 | 29 | -- | -- |
| 80.19 | 0.417 | 3.28 | -0.0827 | 0.0823 | -3.33 | -1.02 | -- | -0.0394 | 7.82 | 9.601 | 29 | -- | -- |
| 45.45 | 0.314 | 3.21 | -0.223 | 0.171 | -5.29 | -- | -23.9 | 0.0871 | 8.03 | 9.437 | 28 | -- | -- |
| 46.17 | 0.316 | 3.24 | -0.0475 | 0.14 | 1.96 | -- | -- | 0.128 | 7.99 | 10.89 | 36 | -- | -- |
| 46.59 | 0.318 | 3.2 | -0.277 | -- | -6.22 | -- | -28 | 0.0924 | -- | 9.46 | 24 | -- | -- |
| 50.67 | 0.334 | 3.26 | -0.0848 | 0.142 | -- | -0.0014 | -- | 0.0769 | 8.63 | -- | -- | -- | -- |
| 50.67 | 0.333 | 3.26 | -0.0848 | 0.142 | -- | -- | -- | 0.0769 | 8.63 | -- | -- | -- | -- |
| 47.13 | 0.32 | 3.27 | -0.0542 | -- | 2.17 | -- | -- | 0.0876 | -- | 10.81 | 38 | -- | -- |
| 45.92 | 0.316 | 3.26 | -- | 0.153 | 2.23 | -- | -- | 0.0921 | 8.2 | 10.85 | 40 | -- | -- |
| 51.82 | 0.336 | 3.27 | -0.0844 | -- | -- | -- | -- | 0.0782 | -- | -- | -- | -- | -- |
| 50.86 | 0.334 | 3.26 | -- | 0.142 | -- | -- | -- | 0.0864 | 8.67 | -- | -- | -- | -- |
| 47.2 | 0.32 | 3.27 | -- | -- | 2.19 | -- | -- | 0.0937 | -- | 10.86 | 69 | -- | -- |
| 52.01 | 0.337 | 3.27 | -- | -- | -- | -- | -- | 0.0875 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.81 | wind | 9.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 3 | 45.82 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 13 | 45.82 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 43 | 46.23 | wind | 9.0 | 30 | > th | dose dependent | sin | 17 | NA |
| 58 | 46.69 | wind | 9.0 | 30 | > th | dose dependent | rect. | 15 | 11 |
| 76 | 46.70 | wind | 9.0 | 30 | > th | dose dependent | rect. | 15 | 7 |
| 243 | 47.20 | wind | 3.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 285 | 47.23 | wind | 9.0 | 30 | > th | dose dependent | no | NA | NA |
| 370 | 47.27 | wind | 3.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 431 | 47.54 | wind | 9.0 | 30 | > th | dose independent | sin | 16 | NA |
| 438 | 47.58 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 442 | 47.60 | wind | 9.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 443 | 47.60 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 480 | 47.70 | wind | 9.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 481 | 47.70 | wind | 9.0 | 30 | > th | dose independent | rect. | 15 | 11 |
| 500 | 47.72 | wind | 9.0 | 30 | > th | dose independent | rect. | 15 | 7 |
| 514 | 47.73 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 524 | 47.76 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 13 |
| 526 | 47.77 | wind | 9.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 534 | 47.77 | wind | 9.0 | 4320 | < th | dose independent | rect. | 21 | 16 |
| 535 | 47.78 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 537 | 47.78 | wind | 9.0 | 4320 | > th | dose independent | rect. | 5 | 7 |
| 542 | 47.78 | wind | 9.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 613 | 47.87 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 626 | 47.90 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 627 | 47.90 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 633 | 47.91 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 634 | 47.91 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 16 | 23 |
| 668 | 47.92 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 669 | 47.93 | wind | 9.0 | 30 | < th | dose independent | sin | 17 | NA |
| 673 | 47.93 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 4 | 9 |
| 714 | 47.94 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 833 | 47.99 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 7 |
| 846 | 48.01 | wind | 3.0 | 4320 | > th | dose independent | rect. | 23 | 3 |
| 857 | 48.03 | wind | 3.0 | 4320 | < th | dose independent | rect. | 23 | 3 |
| 875 | 48.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 876 | 48.07 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 888 | 48.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 911 | 48.10 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 921 | 48.11 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 941 | 48.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 944 | 48.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 945 | 48.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 946 | 48.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 957 | 48.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 6 |
| 958 | 48.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 960 | 48.15 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 961 | 48.15 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 964 | 48.16 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 973 | 48.16 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 985 | 48.18 | wind | 7.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 991 | 48.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 992 | 48.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 1000 | 48.19 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |