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Os06g0300800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0133) R2 : 0.45
β1 : 0.94 (0.0487) R2dD : 0.466 R2D : 0.42
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.121 (0.0284) R2dN8 : 0.0295 R2N8 : -0.0164
σ : 0.25
deviance : 28.54
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.79 0.214 11.4 1.36 0.248 -0.143 0.119 2.09 0.244 12.7 15.79 643 -- --
24.11 0.229 11.4 0.98 0.244 -0.0924 -0.12 -- 0.142 12.3 13.76 1023 -- --
20.78 0.212 11.4 1.35 0.252 -0.158 -- 2.09 0.247 12.8 16.09 536 -- --
24.17 0.229 11.4 0.977 0.243 -0.0964 -- -- 0.141 12.5 14.57 973 -- --
24.47 0.23 11.4 1.4 -- -0.27 -- 1.92 0.264 -- 16.26 839 -- --
24.24 0.231 11.4 0.953 0.259 -- -0.112 -- 0.126 12.3 -- -- -- --
24.3 0.231 11.4 0.949 0.26 -- -- -- 0.125 12.4 -- -- -- --
27.52 0.244 11.4 1.01 -- -0.243 -- -- 0.162 -- 14.6 937 -- --
28.75 0.25 11.5 -- 0.285 0.671 -- -- -0.206 12.9 18.8 47520 -- --
28.54 0.25 11.4 0.94 -- -- -- -- 0.121 -- -- -- -- --
48.02 0.324 11.5 -- 0.246 -- -- -- 0.0198 12.2 -- -- -- --
33.42 0.269 11.5 -- -- 0.641 -- -- -0.21 -- 19 47520 -- --
51.84 0.336 11.5 -- -- -- -- -- 0.0169 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.55 wind 1.0 43200 < th dose independent rect. 2 2
2 19.57 wind 1.0 43200 > th dose independent rect. 2 2
4 19.72 radiation 1.0 4320 > th dose independent rect. 18 1
16 19.77 humidity 90.0 14400 > th dose independent rect. 23 1
18 19.81 humidity 90.0 14400 > th dose independent rect. 20 8
21 19.83 humidity 90.0 14400 > th dose independent rect. 22 9
30 19.89 humidity 90.0 14400 < th dose independent rect. 23 8
62 20.05 humidity 90.0 14400 < th dose independent rect. 20 8
79 20.10 humidity 90.0 14400 < th dose independent rect. 23 2
81 20.10 humidity 90.0 14400 > th dose dependent rect. 24 1
87 20.11 humidity 90.0 14400 > th dose dependent rect. 5 1
91 20.13 humidity 90.0 14400 > th dose independent sin 10 NA
97 20.14 wind 1.0 43200 < th dose dependent rect. 2 2
101 20.16 radiation 1.0 4320 < th dose dependent rect. 18 11
104 20.17 wind 1.0 43200 < th dose independent rect. 2 6
111 20.18 humidity 90.0 14400 > th dose dependent rect. 19 11
112 20.18 humidity 90.0 14400 > th dose dependent rect. 21 11
117 20.19 humidity 90.0 14400 > th dose dependent rect. 4 3
127 20.20 humidity 90.0 14400 > th dose dependent rect. 21 6
151 20.23 humidity 90.0 14400 > th dose dependent rect. 3 5
161 20.24 humidity 90.0 14400 > th dose dependent sin 10 NA
170 20.25 radiation 1.0 4320 < th dose dependent rect. 18 1
173 20.25 radiation 1.0 4320 < th dose dependent rect. 18 7
216 20.31 humidity 90.0 14400 < th dose independent sin 10 NA
225 20.32 radiation 1.0 4320 < th dose independent rect. 18 7
245 20.34 radiation 1.0 4320 < th dose independent rect. 18 1
281 20.38 humidity 90.0 43200 > th dose independent rect. 10 2
312 20.41 radiation 1.0 14400 < th dose dependent rect. 23 6
327 20.43 humidity 90.0 43200 > th dose dependent rect. 10 2
339 20.45 wind 1.0 43200 > th dose independent rect. 2 6
438 20.56 radiation 1.0 43200 < th dose dependent rect. 13 3
439 20.56 radiation 1.0 43200 < th dose dependent rect. 11 5
493 20.61 humidity 90.0 43200 < th dose independent rect. 11 2
494 20.61 radiation 1.0 43200 > th dose independent rect. 11 3
495 20.61 radiation 1.0 43200 < th dose independent rect. 11 3
501 20.61 radiation 1.0 14400 < th dose dependent rect. 4 1
507 20.62 radiation 1.0 43200 < th dose independent rect. 13 2
522 20.63 radiation 1.0 43200 > th dose independent rect. 13 1
577 20.66 wind 1.0 14400 > th dose independent rect. 11 1
580 20.66 radiation 40.0 43200 < th dose independent rect. 16 9
584 20.67 atmosphere 1005.0 43200 < th dose independent rect. 10 1
600 20.68 humidity 90.0 14400 < th dose independent rect. 5 1
615 20.68 temperature 30.0 720 < th dose dependent rect. 12 21
651 20.70 radiation 1.0 4320 < th dose dependent rect. 18 16
662 20.71 radiation 1.0 43200 < th dose dependent rect. 6 1
677 20.72 radiation 1.0 4320 < th dose dependent rect. 18 13
680 20.72 temperature 10.0 720 > th dose dependent rect. 6 23
718 20.75 temperature 10.0 720 > th dose dependent rect. 8 21
756 20.77 radiation 1.0 4320 < th dose dependent sin 11 NA
762 20.78 wind 3.0 14400 > th dose independent rect. 13 1
769 20.78 radiation 10.0 10 < th dose independent rect. 17 23
770 20.78 wind 3.0 14400 < th dose dependent rect. 11 1
771 20.78 atmosphere 1005.0 43200 < th dose dependent rect. 2 1
776 20.78 wind 1.0 43200 < th dose dependent rect. 2 6
786 20.79 atmosphere 1000.0 43200 > th dose independent rect. 3 1
787 20.79 atmosphere 1000.0 43200 < th dose independent rect. 3 1
799 20.79 atmosphere 1005.0 43200 < th dose dependent rect. 23 1
815 20.80 precipitation 0.1 43200 < th dose independent rect. 10 1
822 20.80 precipitation 0.1 43200 < th dose dependent rect. 10 1
825 20.80 atmosphere 1005.0 43200 < th dose dependent rect. 23 6
827 20.80 radiation 1.0 43200 < th dose dependent rect. 6 10
854 20.81 temperature 15.0 720 > th dose dependent rect. 1 23
884 20.83 atmosphere 1005.0 43200 > th dose independent rect. 10 1
885 20.83 precipitation 0.1 43200 > th dose independent rect. 10 1
892 20.83 temperature 15.0 720 > th dose dependent no NA NA
895 20.83 precipitation 0.1 43200 > th dose dependent rect. 10 1
917 20.83 temperature 30.0 720 < th dose dependent rect. 17 23
921 20.84 temperature 20.0 43200 > th dose independent rect. 17 1
922 20.84 wind 7.0 4320 > th dose independent rect. 7 3
934 20.84 wind 7.0 4320 > th dose dependent rect. 7 3
937 20.84 temperature 20.0 1440 > th dose dependent rect. 17 4
954 20.84 temperature 30.0 720 < th dose dependent rect. 7 23
959 20.85 temperature 20.0 43200 > th dose independent rect. 9 1
960 20.85 humidity 90.0 14400 > th dose independent rect. 5 1
971 20.85 radiation 1.0 14400 < th dose independent rect. 18 13
975 20.85 temperature 30.0 720 < th dose dependent no NA NA
1000 20.85 temperature 15.0 720 > th dose dependent rect. 11 23