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Os06g0298500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.54 (0.0293) R2 : 0.688
β1 : 1.32 (0.108) R2dD : 0.108 R2D : 0.101
β2 : 0.96 (0.0837) R2dC : 0.128 R2C : 0.303
β3 : 1.58 (0.0997) R2dE : 0.244 R2E : 0.449
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.343 (0.0625) R2dN8 : 0.0277 R2N8 : -0.000103
σ : 0.548
deviance : 138.23
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C
peak time of C : 13.6
E
wheather : temperature
threshold : 10.17
memory length : 10
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.95
open length of G : 17.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
136.76 0.549 6.53 1.38 0.945 1.59 -0.668 0.862 0.356 13.6 10.54 10 8.95 17.1
137.66 0.546 6.53 1.33 0.949 1.6 -0.396 -- 0.348 13.5 10.05 11 8.95 17.9
138.06 0.547 6.53 1.33 0.953 1.58 -- 0.319 0.346 13.6 10.22 10 8.95 17.1
138.23 0.548 6.54 1.32 0.96 1.58 -- -- 0.343 13.6 10.17 10 8.95 17.1
174.1 0.615 6.54 1.29 -- 2.22 -- 0.27 0.319 -- 13.75 7 8.95 17.9
176.26 0.622 6.55 1.52 1.93 -- 0.0622 -- 0.381 15.3 -- -- -- --
176.27 0.622 6.55 1.52 1.93 -- -- -- 0.381 15.3 -- -- -- --
173.23 0.613 6.56 1.17 -- 2.2 -- -- 0.201 -- 13.62 12 8.38 17.5
180.23 0.625 6.58 -- 0.784 1.87 -- -- 0.147 13.4 14.74 17 8.89 17.1
386.5 0.919 6.55 1.44 -- -- -- -- 0.33 -- -- -- -- --
236.93 0.72 6.58 -- 1.9 -- -- -- 0.212 15.3 -- -- -- --
203.7 0.665 6.6 -- -- 2.48 -- -- 0.07 -- 15.73 20 8.82 17.1
440.84 0.98 6.58 -- -- -- -- -- 0.171 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.78 temperature 10.0 10 > th dose dependent rect. 9 17
16 144.60 temperature 30.0 30 < th dose dependent rect. 2 18
54 147.42 temperature 20.0 10 > th dose independent rect. 22 16
58 147.51 radiation 30.0 270 < th dose dependent rect. 1 16
93 149.07 temperature 10.0 270 > th dose dependent rect. 20 15
105 149.27 temperature 15.0 10 > th dose dependent rect. 22 16
113 149.43 temperature 10.0 270 > th dose dependent rect. 19 17
116 149.54 radiation 30.0 10 < th dose independent rect. 2 7
127 149.80 humidity 70.0 30 > th dose independent rect. 2 7
142 150.06 humidity 50.0 10 > th dose dependent rect. 2 18
189 150.61 radiation 40.0 30 < th dose independent rect. 2 18
212 150.92 wind 7.0 10 < th dose independent rect. 9 17
216 150.97 radiation 1.0 270 < th dose independent rect. 2 16
218 150.98 radiation 40.0 10 < th dose dependent rect. 2 20
224 151.03 temperature 10.0 270 > th dose dependent rect. 19 6
237 151.14 precipitation 0.1 10 < th dose independent rect. 9 17
239 151.14 precipitation 0.1 10 < th dose dependent rect. 9 17
267 151.41 humidity 50.0 14400 > th dose independent rect. 3 6
292 151.64 precipitation 0.1 10 < th dose independent rect. 2 7
294 151.64 precipitation 0.1 10 < th dose dependent rect. 2 7
319 151.82 temperature 15.0 90 > th dose independent rect. 8 18
329 151.92 radiation 30.0 270 < th dose dependent rect. 1 10
330 151.92 humidity 60.0 30 > th dose dependent rect. 2 16
331 151.93 wind 5.0 10 < th dose independent rect. 2 7
348 152.03 temperature 10.0 270 > th dose dependent rect. 5 8
360 152.11 wind 9.0 270 < th dose dependent rect. 6 8
388 152.25 temperature 15.0 10 > th dose independent rect. 9 17
400 152.30 humidity 70.0 10 > th dose independent rect. 2 18
442 152.55 radiation 1.0 270 > th dose independent sin 3 NA
452 152.62 wind 9.0 90 < th dose dependent rect. 8 18
467 152.69 temperature 10.0 10 > th dose independent rect. 2 7
469 152.69 temperature 30.0 10 < th dose independent rect. 2 7
470 152.69 humidity 50.0 10 > th dose independent rect. 2 7
472 152.69 atmosphere 995.0 10 > th dose independent rect. 2 7
473 152.69 atmosphere 1015.0 10 < th dose independent rect. 2 7
503 152.76 temperature 10.0 1440 > th dose independent rect. 3 7
506 152.76 atmosphere 995.0 1440 > th dose independent rect. 3 7
507 152.76 temperature 10.0 1440 > th dose independent rect. 10 17
510 152.77 atmosphere 1015.0 10 < th dose independent rect. 9 17
531 152.92 radiation 10.0 270 < th dose dependent sin 4 NA
560 153.05 radiation 1.0 270 < th dose independent sin 3 NA
566 153.08 temperature 25.0 90 < th dose independent rect. 2 19
583 153.15 temperature 20.0 270 > th dose independent rect. 6 19
616 153.28 radiation 40.0 30 < th dose dependent rect. 2 7
618 153.32 atmosphere 995.0 10 > th dose dependent rect. 2 7
623 153.34 temperature 15.0 270 > th dose independent rect. 5 9
625 153.35 wind 7.0 270 < th dose independent rect. 6 19
645 153.46 wind 7.0 270 < th dose independent rect. 6 8
647 153.47 wind 9.0 30 < th dose dependent rect. 2 7
661 153.56 temperature 10.0 90 > th dose dependent rect. 21 5
680 153.64 wind 9.0 270 < th dose dependent rect. 6 19
683 153.65 humidity 70.0 10 > th dose independent rect. 2 16
702 153.72 radiation 40.0 90 < th dose dependent rect. 11 22
708 153.75 temperature 30.0 30 < th dose dependent rect. 2 7
725 153.81 temperature 10.0 10 > th dose dependent rect. 21 5
760 153.95 atmosphere 1015.0 1440 < th dose independent rect. 3 7
794 154.05 wind 9.0 1440 < th dose independent rect. 3 6
798 154.05 humidity 50.0 1440 > th dose independent rect. 3 6
845 154.19 wind 7.0 270 < th dose independent rect. 5 21
851 154.20 radiation 20.0 270 < th dose independent rect. 24 9
865 154.23 radiation 40.0 10 < th dose dependent rect. 2 10
869 154.25 radiation 1.0 270 > th dose independent rect. 4 10
882 154.26 radiation 10.0 270 > th dose independent sin 6 NA
885 154.26 radiation 40.0 10 < th dose dependent rect. 12 21
889 154.28 radiation 1.0 270 > th dose independent rect. 6 8
901 154.29 radiation 1.0 270 > th dose independent rect. 17 21
909 154.31 radiation 40.0 90 < th dose dependent rect. 13 19
939 154.39 wind 1.0 270 > th dose independent rect. 13 16
956 154.42 radiation 1.0 270 > th dose dependent sin 8 NA
976 154.46 temperature 15.0 10 > th dose dependent rect. 8 8
977 154.46 radiation 40.0 10 < th dose dependent rect. 2 12
978 154.46 radiation 40.0 90 < th dose dependent rect. 15 17