Os06g0298100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0298100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.87 | 0.641 | 7.59 | -3.34 | 0.874 | 3.97 | 2.04 | 11.5 | -1.37 | 0.831 | 0.3593 | 1462 | -- | -- |
| 234.82 | 0.714 | 7.58 | -2.44 | 0.566 | 1.45 | 2.46 | -- | -1.4 | 0.512 | 0.8527 | 1609 | -- | -- |
| 188.46 | 0.639 | 7.58 | -3.35 | 0.358 | 4.08 | -- | 12 | -1.35 | 0.793 | 0.3358 | 1520 | -- | -- |
| 248.64 | 0.734 | 7.4 | -2.54 | 0.519 | 1.37 | -- | -- | -1.24 | 22.2 | 1.778 | 1826 | -- | -- |
| 191.04 | 0.644 | 7.58 | -3.36 | -- | 4.41 | -- | 12.5 | -1.35 | -- | 0.3392 | 1541 | -- | -- |
| 242.25 | 0.73 | 7.45 | -2.61 | 1 | -- | 2.36 | -- | -1.36 | 0.488 | -- | -- | -- | -- |
| 265.96 | 0.764 | 7.45 | -2.7 | 1 | -- | -- | -- | -1.37 | 0.707 | -- | -- | -- | -- |
| 255.18 | 0.744 | 7.39 | -2.35 | -- | 2.09 | -- | -- | -1.17 | -- | 1.184 | 1694 | -- | -- |
| 380.52 | 0.909 | 7.42 | -- | 0.161 | 2.46 | -- | -- | -1.12 | 22 | 2.244e-07 | 3102 | -- | -- |
| 328.66 | 0.847 | 7.43 | -2.66 | -- | -- | -- | -- | -1.35 | -- | -- | -- | -- | -- |
| 457.83 | 1 | 7.38 | -- | 0.96 | -- | -- | -- | -1.07 | 0.576 | -- | -- | -- | -- |
| 377.53 | 0.905 | 7.42 | -- | -- | 3.18 | -- | -- | -0.912 | -- | 0.0001281 | 3098 | -- | -- |
| 515.61 | 1.06 | 7.37 | -- | -- | -- | -- | -- | -1.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.25 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 5 | 184.04 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 7 | 184.35 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 10 | 184.61 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 17 | 185.04 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 21 | 185.20 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 28 | 185.44 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 37 | 185.69 | temperature | 20 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 40 | 185.76 | temperature | 20 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 48 | 185.88 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 57 | 186.09 | temperature | 20 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 58 | 186.15 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 60 | 186.18 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 63 | 186.22 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 70 | 186.29 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 71 | 186.32 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 77 | 186.44 | radiation | 10 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 79 | 186.45 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 88 | 186.48 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 92 | 186.53 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 103 | 186.67 | radiation | 40 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 107 | 186.73 | radiation | 40 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 113 | 186.79 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 115 | 186.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 126 | 186.84 | temperature | 20 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 127 | 186.85 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 128 | 186.85 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 131 | 186.87 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 133 | 186.87 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 136 | 186.89 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 143 | 186.93 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 144 | 186.94 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 145 | 186.94 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 148 | 186.95 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 164 | 186.99 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 170 | 187.01 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 188 | 187.02 | wind | 1 | 43200 | < th | dose dependent | sin | 12 | NA |
| 201 | 187.07 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 205 | 187.08 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 244 | 187.23 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 351 | 187.56 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 356 | 187.58 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 370 | 187.61 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 373 | 187.61 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 374 | 187.61 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 386 | 187.63 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 409 | 187.70 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 438 | 187.78 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 13 |
| 444 | 187.81 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 447 | 187.82 | temperature | 20 | 14400 | > th | dose dependent | sin | 9 | NA |
| 449 | 187.83 | temperature | 25 | 14400 | > th | dose independent | sin | 1 | NA |
| 472 | 187.89 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 473 | 187.89 | temperature | 20 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 482 | 187.91 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 502 | 187.94 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 543 | 188.04 | temperature | 25 | 14400 | < th | dose independent | sin | 1 | NA |
| 585 | 188.13 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 609 | 188.18 | temperature | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 617 | 188.19 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 647 | 188.25 | temperature | 20 | 14400 | > th | dose independent | sin | 11 | NA |
| 693 | 188.31 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 698 | 188.31 | humidity | 90 | 43200 | > th | dose independent | rect. | 14 | 14 |
| 701 | 188.31 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 714 | 188.34 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 761 | 188.40 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 781 | 188.43 | temperature | 25 | 14400 | > th | dose dependent | sin | 19 | NA |
| 897 | 188.58 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 925 | 188.62 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 957 | 188.67 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 970 | 188.69 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |