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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0297500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.17 (0.0207) R2 : 0.00493
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0655 (0.0436) R2dN8 : 0.00636 R2N8 : 0.00493
σ : 0.39
deviance : 69.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.12 0.385 3.16 0.232 0.0636 -0.00577 1.59 -1.52 0.102 23.5 0.05995 129 -- --
68.46 0.388 3.16 0.133 0.0397 0.0503 0.478 -- 0.0806 17.2 3.139 10 -- --
68.22 0.385 3.17 0.143 0.0608 -0.0601 -- -0.698 0.0776 0.33 9.33 647 -- --
68.96 0.387 3.17 0.135 0.0385 -0.079 -- -- 0.0757 0.249 24.84 780 -- --
68.42 0.385 3.16 0.144 -- -0.0462 -- -0.724 0.0793 -- 8.645 689 -- --
68.72 0.389 3.17 0.135 0.0434 -- 0.468 -- 0.0792 17.8 -- -- -- --
69.09 0.389 3.17 0.13 0.069 -- -- -- 0.0804 21 -- -- -- --
68.83 0.386 3.17 0.114 -- -0.13 -- -- 0.0581 -- 44.11 1077 -- --
69.18 0.387 3.17 -- 0.00303 -0.142 -- -- 0.0422 0.0773 36.88 1148 -- --
69.37 0.389 3.16 0.13 -- -- -- -- 0.08 -- -- -- -- --
69.54 0.39 3.17 -- 0.0689 -- -- -- 0.0659 21.1 -- -- -- --
69.09 0.387 3.18 -- -- -0.168 -- -- 0.032 -- 42.99 2398 -- --
69.81 0.39 3.17 -- -- -- -- -- 0.0655 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.96 atmosphere 1005.0 10 > th dose independent rect. 20 1
3 63.03 temperature 20.0 30 > th dose independent rect. 20 1
4 63.06 wind 5.0 30 < th dose independent rect. 20 1
5 63.06 atmosphere 1000.0 10 > th dose dependent rect. 20 1
9 63.07 wind 7.0 30 < th dose dependent rect. 20 1
11 63.08 wind 1.0 30 > th dose independent rect. 20 1
15 63.08 temperature 10.0 30 > th dose independent rect. 20 1
17 63.08 temperature 30.0 30 < th dose independent rect. 20 1
18 63.08 humidity 50.0 30 > th dose independent rect. 20 1
22 63.08 atmosphere 1010.0 30 < th dose independent rect. 20 1
24 63.08 radiation 1.0 30 < th dose independent rect. 20 1
29 63.08 precipitation 0.1 30 < th dose independent rect. 20 1
30 63.08 temperature 10.0 30 > th dose independent rect. 21 23
33 63.08 radiation 1.0 30 < th dose dependent rect. 20 1
38 63.08 precipitation 0.1 30 < th dose dependent rect. 20 1
39 63.09 humidity 50.0 30 > th dose dependent rect. 20 1
40 63.10 humidity 90.0 30 < th dose independent rect. 20 1
41 63.10 temperature 10.0 30 > th dose dependent rect. 20 1
48 63.12 humidity 90.0 30 < th dose dependent rect. 20 1
49 63.13 temperature 30.0 30 < th dose dependent rect. 20 1
51 63.14 temperature 10.0 1440 > th dose independent rect. 21 1
54 63.14 temperature 30.0 1440 < th dose independent rect. 21 1
58 63.14 humidity 50.0 1440 > th dose independent rect. 21 1
64 63.14 atmosphere 995.0 1440 > th dose independent rect. 21 1
65 63.14 radiation 1.0 1440 < th dose independent rect. 21 1
85 63.14 temperature 10.0 1440 > th dose independent rect. 22 23
88 63.15 wind 1.0 30 > th dose dependent rect. 20 1
89 63.15 atmosphere 1015.0 30 < th dose dependent rect. 20 1
90 63.15 radiation 30.0 1440 < th dose dependent rect. 21 1
145 63.36 atmosphere 1000.0 30 > th dose independent rect. 21 23
155 63.54 precipitation 0.1 30 < th dose independent rect. 21 23
156 63.54 precipitation 0.1 30 < th dose dependent rect. 21 23
169 63.99 wind 9.0 30 < th dose independent rect. 21 23
177 64.20 humidity 50.0 30 > th dose independent rect. 21 23
187 64.52 wind 1.0 30 > th dose independent rect. 21 23
264 65.55 temperature 30.0 30 < th dose independent rect. 21 23
268 65.58 atmosphere 1005.0 90 > th dose dependent rect. 2 1
278 65.72 humidity 70.0 720 > th dose independent rect. 21 12
280 65.72 atmosphere 1005.0 10 > th dose dependent rect. 2 2
293 65.86 precipitation 0.1 1440 < th dose independent rect. 21 1
294 65.86 precipitation 0.1 1440 < th dose dependent rect. 21 1
304 65.92 wind 1.0 720 < th dose dependent rect. 24 1
310 65.95 temperature 25.0 30 > th dose dependent rect. 20 9
344 66.00 humidity 70.0 720 > th dose independent rect. 3 6
349 66.03 precipitation 0.1 720 < th dose independent rect. 7 8
353 66.03 precipitation 0.1 720 < th dose dependent rect. 7 8
355 66.05 atmosphere 1000.0 30 > th dose independent rect. 3 23
374 66.15 wind 9.0 1440 < th dose independent rect. 3 1
375 66.15 temperature 10.0 1440 > th dose independent rect. 3 1
378 66.15 temperature 30.0 1440 < th dose independent rect. 3 1
382 66.15 humidity 50.0 1440 > th dose independent rect. 3 1
391 66.15 atmosphere 995.0 1440 > th dose independent rect. 3 1
392 66.15 radiation 1.0 1440 < th dose independent rect. 3 1
413 66.15 temperature 10.0 1440 > th dose independent rect. 4 23
417 66.15 radiation 1.0 1440 < th dose dependent rect. 3 1
438 66.17 atmosphere 995.0 720 > th dose independent rect. 7 8
440 66.17 temperature 20.0 30 > th dose dependent rect. 2 1
444 66.19 temperature 20.0 30 > th dose independent rect. 2 1
447 66.20 atmosphere 1005.0 90 > th dose independent rect. 2 1
449 66.20 temperature 10.0 720 > th dose independent rect. 7 8
450 66.20 atmosphere 1015.0 720 < th dose independent rect. 7 8
451 66.20 temperature 10.0 720 > th dose independent rect. 15 16
453 66.21 wind 3.0 30 < th dose independent rect. 2 1
454 66.21 humidity 90.0 30 > th dose independent rect. 2 1
456 66.21 wind 9.0 720 < th dose independent rect. 19 8
457 66.21 precipitation 0.1 30 < th dose independent rect. 3 23
458 66.21 wind 3.0 30 < th dose dependent rect. 2 1
463 66.21 precipitation 0.1 30 < th dose dependent rect. 3 23
472 66.22 humidity 80.0 30 > th dose dependent rect. 2 1
474 66.22 temperature 25.0 90 > th dose dependent rect. 1 3
477 66.23 temperature 10.0 30 > th dose independent rect. 2 1
479 66.23 temperature 30.0 30 < th dose independent rect. 2 1
480 66.23 humidity 50.0 30 > th dose independent rect. 2 1
485 66.23 atmosphere 1010.0 30 < th dose independent rect. 2 1
487 66.23 radiation 1.0 30 < th dose independent rect. 2 1
492 66.23 precipitation 0.1 30 < th dose independent rect. 2 1
494 66.23 temperature 10.0 720 > th dose independent rect. 19 8
495 66.23 temperature 30.0 720 < th dose independent rect. 19 8
496 66.23 humidity 50.0 720 > th dose independent rect. 19 8
497 66.23 atmosphere 995.0 720 > th dose independent rect. 19 8
498 66.23 radiation 1.0 720 < th dose independent rect. 19 8
503 66.23 temperature 10.0 720 > th dose independent rect. 3 16
504 66.23 temperature 10.0 30 > th dose independent rect. 3 23
505 66.23 humidity 50.0 30 > th dose dependent rect. 2 1
508 66.23 radiation 1.0 30 < th dose dependent rect. 2 1
513 66.23 precipitation 0.1 30 < th dose dependent rect. 2 1
517 66.23 radiation 1.0 720 < th dose dependent rect. 19 8
523 66.24 radiation 40.0 720 < th dose independent rect. 15 16
529 66.25 atmosphere 995.0 720 > th dose independent rect. 9 12
530 66.25 atmosphere 1000.0 720 > th dose independent rect. 21 12
533 66.26 temperature 30.0 720 < th dose independent rect. 15 6
534 66.26 atmosphere 1015.0 30 < th dose dependent rect. 2 1
543 66.28 precipitation 0.1 720 < th dose independent rect. 9 12
545 66.28 precipitation 0.1 720 < th dose dependent rect. 9 12
546 66.29 wind 1.0 30 > th dose independent rect. 2 1
547 66.29 atmosphere 995.0 720 > th dose independent rect. 3 16
553 66.30 temperature 30.0 720 < th dose independent rect. 21 12
557 66.31 atmosphere 995.0 720 > th dose independent rect. 15 16
559 66.31 wind 1.0 1440 < th dose dependent rect. 21 1
560 66.31 temperature 30.0 30 < th dose dependent rect. 2 1
564 66.32 temperature 30.0 720 < th dose independent rect. 3 6
565 66.32 temperature 10.0 720 > th dose independent rect. 9 12
566 66.32 temperature 10.0 720 > th dose independent rect. 21 12
571 66.33 wind 1.0 720 > th dose independent rect. 21 4
572 66.33 precipitation 0.1 720 < th dose independent rect. 19 8
575 66.33 precipitation 0.1 720 < th dose dependent rect. 19 8
577 66.34 atmosphere 1015.0 30 < th dose independent rect. 21 23
589 66.36 wind 9.0 720 < th dose independent rect. 21 12
595 66.37 temperature 30.0 270 < th dose independent rect. 9 12
608 66.39 wind 1.0 720 < th dose independent rect. 24 1
643 66.41 radiation 1.0 720 < th dose dependent rect. 21 8
644 66.42 wind 1.0 720 > th dose independent rect. 9 4
646 66.42 atmosphere 995.0 720 > th dose independent rect. 21 18
655 66.45 wind 9.0 720 < th dose independent rect. 9 12
659 66.46 temperature 30.0 720 < th dose independent rect. 9 4
661 66.47 precipitation 0.1 720 < th dose independent rect. 15 16
664 66.47 precipitation 0.1 720 < th dose dependent rect. 15 16
665 66.48 wind 9.0 720 < th dose independent rect. 15 6
666 66.48 wind 1.0 720 > th dose independent rect. 9 12
667 66.48 humidity 50.0 30 > th dose independent rect. 3 23
676 66.51 temperature 10.0 720 > th dose independent rect. 15 6
677 66.51 temperature 10.0 720 > th dose independent rect. 21 18
681 66.51 radiation 30.0 720 < th dose dependent rect. 21 9
683 66.52 wind 9.0 720 < th dose independent rect. 3 6
684 66.52 temperature 10.0 720 > th dose independent rect. 3 6
686 66.52 atmosphere 995.0 720 > th dose independent rect. 3 6
687 66.52 precipitation 0.1 720 < th dose independent rect. 9 8
688 66.52 temperature 10.0 720 > th dose independent rect. 9 18
691 66.52 precipitation 0.1 720 < th dose dependent rect. 9 8
694 66.53 precipitation 0.1 720 < th dose independent rect. 15 6
695 66.53 atmosphere 995.0 720 > th dose independent rect. 9 18
699 66.53 precipitation 0.1 720 < th dose dependent rect. 15 6
702 66.54 atmosphere 995.0 720 > th dose independent rect. 15 6
703 66.54 atmosphere 995.0 720 > th dose independent rect. 9 8
704 66.54 precipitation 0.1 720 < th dose independent rect. 21 12
705 66.54 atmosphere 995.0 720 > th dose independent rect. 17 16
708 66.54 precipitation 0.1 720 < th dose dependent rect. 21 12
709 66.55 humidity 90.0 90 < th dose independent rect. 2 1
711 66.55 temperature 10.0 720 > th dose independent rect. 21 9
712 66.55 temperature 30.0 720 < th dose independent rect. 21 9
713 66.55 humidity 50.0 720 > th dose independent rect. 21 9
716 66.55 atmosphere 995.0 720 > th dose independent rect. 21 9
717 66.55 radiation 20.0 720 < th dose independent rect. 21 9
720 66.55 temperature 10.0 720 > th dose independent rect. 6 15
723 66.56 temperature 10.0 720 > th dose independent rect. 9 9
724 66.56 atmosphere 1015.0 720 < th dose independent rect. 9 9
725 66.56 atmosphere 1015.0 720 < th dose independent rect. 9 12
727 66.56 temperature 10.0 720 > th dose independent rect. 18 15
728 66.56 humidity 50.0 720 > th dose independent rect. 18 15
745 66.58 atmosphere 995.0 30 > th dose dependent rect. 21 23
753 66.60 atmosphere 995.0 720 > th dose independent rect. 5 16
756 66.61 radiation 40.0 720 < th dose independent rect. 15 6
763 66.62 wind 9.0 720 < th dose independent rect. 21 9
764 66.62 atmosphere 1015.0 720 < th dose independent rect. 6 15
765 66.62 precipitation 0.1 720 < th dose independent rect. 9 18
770 66.62 precipitation 0.1 720 < th dose dependent rect. 9 18
772 66.63 humidity 90.0 90 < th dose independent rect. 2 3
773 66.63 atmosphere 1000.0 720 > th dose independent rect. 21 4
780 66.63 radiation 1.0 720 < th dose independent rect. 21 8
784 66.63 wind 1.0 720 > th dose independent rect. 9 9
787 66.64 wind 1.0 720 > th dose independent rect. 15 6
806 66.65 atmosphere 995.0 720 > th dose independent rect. 1 20
816 66.66 precipitation 0.1 720 < th dose independent rect. 1 20
821 66.66 precipitation 0.1 720 < th dose dependent rect. 1 20
823 66.67 wind 9.0 720 < th dose independent rect. 9 4
825 66.67 wind 9.0 30 < th dose independent rect. 3 23
829 66.68 wind 9.0 720 < th dose independent rect. 18 15
836 66.69 atmosphere 1015.0 720 < th dose independent rect. 15 6
837 66.69 temperature 25.0 270 > th dose independent rect. 17 13
841 66.70 radiation 1.0 720 > th dose independent rect. 9 3
842 66.70 precipitation 0.1 720 < th dose independent rect. 9 4
845 66.70 atmosphere 995.0 720 > th dose independent rect. 13 20
846 66.70 precipitation 0.1 720 < th dose dependent rect. 9 4
866 66.74 temperature 10.0 720 > th dose independent rect. 9 4
867 66.74 atmosphere 995.0 720 > th dose independent rect. 9 4
868 66.74 atmosphere 1015.0 720 < th dose independent rect. 9 4
869 66.74 wind 1.0 10 > th dose independent rect. 23 12
871 66.74 temperature 10.0 720 > th dose independent rect. 13 20
876 66.75 temperature 10.0 720 > th dose independent rect. 21 4
877 66.75 temperature 30.0 720 < th dose independent rect. 21 4
878 66.75 humidity 50.0 720 > th dose independent rect. 21 4
882 66.75 radiation 1.0 720 < th dose independent rect. 21 4
887 66.75 precipitation 0.1 720 < th dose independent rect. 3 6
888 66.75 temperature 25.0 90 > th dose independent rect. 19 10
890 66.75 temperature 10.0 720 > th dose independent rect. 1 20
893 66.75 radiation 1.0 720 < th dose dependent rect. 21 4
898 66.75 precipitation 0.1 720 < th dose dependent rect. 3 6
904 66.76 humidity 60.0 10 > th dose independent rect. 14 12
905 66.76 wind 9.0 720 < th dose independent rect. 15 16
915 66.77 temperature 30.0 720 < th dose independent rect. 15 22
936 66.78 wind 9.0 720 < th dose independent rect. 21 4
953 66.79 precipitation 0.1 720 < th dose independent rect. 5 16
955 66.79 precipitation 0.1 720 < th dose dependent rect. 5 16
958 66.80 temperature 30.0 10 < th dose independent rect. 14 12
963 66.80 temperature 25.0 720 > th dose dependent rect. 3 6
998 66.82 radiation 40.0 30 < th dose independent rect. 14 12
999 66.82 precipitation 0.1 720 < th dose independent rect. 21 18